Rhodoferax koreensis: RD110_14335
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Entry
RD110_14335 CDS
T04721
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
rhy
Rhodoferax koreensis
Pathway
rhy01501
beta-Lactam resistance
rhy01503
Cationic antimicrobial peptide (CAMP) resistance
rhy02020
Two-component system
rhy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RD110_14335
09132 Signal transduction
02020 Two-component system
RD110_14335
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RD110_14335
01503 Cationic antimicrobial peptide (CAMP) resistance
RD110_14335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_14335
02044 Secretion system [BR:
rhy02044
]
RD110_14335
01504 Antimicrobial resistance genes [BR:
rhy01504
]
RD110_14335
Transporters [BR:
rhy02000
]
Other transporters
Pores ion channels [TC:
1
]
RD110_14335
Secretion system [BR:
rhy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RD110_14335
RTX toxin transporter
RD110_14335
Multiple protein transporter
RD110_14335
RaxAB-RaxC type I secretion system protein
RD110_14335
Antimicrobial resistance genes [BR:
rhy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RD110_14335
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RD110_14335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
APW38231
UniProt:
A0A1P8JX03
LinkDB
All DBs
Position
3083646..3084968
Genome browser
AA seq
440 aa
AA seq
DB search
MRSFRPVLLLAAVQWALCASAQAQSLIELYDAARATDATYQSAKAQYDANLAKSDQAKAA
ILPAANLDVGVTRNLFDNTNPDYQRAYTTQSATVSASQPLYRPANWASYEQGKKLIDLAQ
AQLAAAEQDLVLRVSQAYFDVLAASDSLTFVRAQKAAVAEQLASAKRNFEVGTSTITDSR
EAQARYDLVVAQEIAADNDLRVKKLALDQIVSRVDATPKPVLAPIVLPNLQPQDLNGWVT
IAETSHPSVLQALTALDVARLETTKAKAGNKPTIDLTAGYNVTRNPNGTSTSTLNSRYNA
ANIGVQLSLPLFAGFSVQNRIRETLSLEDKAVADLEATRRVVSQATRTAFYGVLSGLGQI
KALEAAEASSQSALEANQLGYRVGVRINIDVLNAQSQLYQTKRDLARARYDVLVGSLRLR
QANGTLRPEDLQAVNALLAP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcttccgtcccgtcctgcttctcgccgccgtgcaatgggcgctgtgcgcctcg
gcccaggcgcaaagcctgatcgaactctacgatgcggcccgcgccaccgacgccacctac
caatcggccaaggcgcaatacgacgccaacctcgccaagtccgaccaagccaaggccgcc
atcctgcctgcggccaacctcgatgtcggcgtgacgcgcaacctcttcgacaacaccaat
cccgactaccagcgggcctacaccacgcagtcggccacggtcagcgcctcgcagccgctg
taccggccggccaactgggccagttacgagcaaggcaagaagctcatcgacctggcccag
gcgcagctcgctgctgccgaacaggatttggtgctccgcgtgagccaggcctatttcgat
gtgctggccgccagcgacagcctgaccttcgtgcgcgcccagaaggccgccgtcgccgag
cagcttgcgtcggccaagcgcaacttcgaggtgggcacgtccaccatcaccgattcgcgc
gaagcccaggcccgctacgatctggtggtcgcccaggagatcgcggccgacaacgacctg
cgtgtcaagaagctcgcactcgaccagatcgtgagccgcgtcgacgccacgccgaaaccg
gtgctcgcacccatcgtgctgcccaaccttcagccgcaggacctgaacggctgggtcacg
atcgccgaaaccagccatccatcggtgctgcaggcgctgaccgcgctcgacgtggcccgg
ctggaaaccaccaaggccaaggcggggaacaagcccaccatcgacctcaccgcgggctac
aacgtcacgcgcaacccgaacggcacctccacctccacgctgaattcgcgctacaacgcg
gccaacatcggcgtgcagctgagtctgccgctctttgccggcttctcggtccagaaccgc
atccgcgaaaccctgtcgctcgaggacaaggccgtggccgacctcgaggccacgcgccgc
gtcgtctcccaggccacgcgcaccgcgttctacggcgtgttgtcgggcctgggccagatc
aaggcgctcgaagccgcagaggcctccagccagagcgcgctcgaagccaaccagctcggc
taccgcgtgggtgtgcgcatcaacatcgacgtgctcaatgcccagagccagctctaccag
accaagcgcgacctggcccgcgcgcgctacgacgtgctcgtcggcagcctgcgcctgcgc
caggccaacggcaccctcaggcccgaagacctgcaggccgtgaacgcgctgctcgcgccc
tga
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