Roseovarius indicus: RIdsm_00769
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Entry
RIdsm_00769 CDS
T06222
Symbol
abfD
Name
(GenBank) 4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
rid
Roseovarius indicus
Pathway
rid00650
Butanoate metabolism
rid00720
Other carbon fixation pathways
rid01100
Metabolic pathways
rid01120
Microbial metabolism in diverse environments
rid01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RIdsm_00769 (abfD)
09102 Energy metabolism
00720 Other carbon fixation pathways
RIdsm_00769 (abfD)
Enzymes [BR:
rid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
RIdsm_00769 (abfD)
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
RIdsm_00769 (abfD)
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Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Acyl-CoA_dh_M
Motif
Other DBs
NCBI-ProteinID:
QEW24985
UniProt:
A0A0T5P565
LinkDB
All DBs
Position
complement(797735..799267)
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AA seq
510 aa
AA seq
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MLMTAQDYRESLRAYSPRVFIDGDRIDSVADEPRLDPGINGVGVTYDFAHRPESERLLTA
TQSSSGKTVNRMLHINESSDDLLQKLEAVRLVCKVSGCAQRYLSHDALNGIYQATHRTDA
THGTDYAQRFMAYLHDVQDRDLTLGVAMTDAKGDRSKRPGQQANPDVYVHIKERRADGIV
IRGTKAIVTGAPYMHEFLVMPCRTHTAEDADYAVCCAVPVDAEGVTIVAKPAGRPGEAAA
KFSARYGQSTGVVIFDDVFVPHDRVFLAGETTEGGFLTTSYATHHRHSCIGARAGFGDLL
IGAGAMMVDANGLDVDRHAHIRDAMVDLITITESFYACGVAASVYCEADPAGSVMPDAVF
SNIGKLLLATKIYDMHRVAHYVSGGLIVALPGPDEDHNPETRADLTAVLGGRPDIPAERR
MEISRMIEDLTVSNQGNWYSVISLHGGGSPEAMKREIWRNYPVAERQELVSDLMDRGVLA
EGRKVSRQPGRCCATGCQPPEKISNTEAAE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgaccgcgcaagactaccgcgaatcccttcgcgcctattccccccgcgtcttc
atcgacggcgaccgcatcgacagcgtcgccgacgagccccgcctagaccccggcatcaac
ggcgtcggcgtcacctacgatttcgcccaccggcccgaatccgaacgcctgctgaccgcc
acccagtcgagcagcggcaaaaccgtcaaccgcatgctccacatcaacgagagcagcgac
gacctcctgcaaaagctcgaagccgtccgcctcgtctgcaaggtctccggctgcgcccag
cgctacctcagccacgacgccctcaacggcatctaccaggccacccaccgcaccgatgcc
acccacggcaccgactatgcgcaacgcttcatggcctacctccatgacgtgcaggaccgc
gacctcaccctcggcgtcgccatgaccgacgccaagggcgaccgctccaagcgacccggc
caacaagccaaccccgatgtctatgtccacatcaaggaacgccgcgccgacggcatcgtc
atccgcggcaccaaggccatcgtcaccggcgcgccctacatgcacgaattcctcgtcatg
ccctgccgcacccacacggcggaagacgccgattatgccgtctgctgcgccgtccccgtc
gatgcagagggcgtgaccatcgtcgccaaacccgcaggccgccccggtgaagcggcggcg
aaattctccgcccgctacggccagtccaccggcgtggtgatcttcgacgacgtcttcgtg
ccgcatgaccgagtcttcctcgccggtgagacgaccgagggcggcttcctcaccacctcc
tacgccacccaccaccgccattcctgcatcggcgcccgcgcgggcttcggcgacctcctg
atcggcgccggcgccatgatggtcgacgccaacggcctcgacgtcgaccgccacgcccat
atccgcgacgccatggtcgacctgatcaccatcaccgaaagcttctacgcctgcggcgtc
gccgcctccgtctattgcgaggccgacccggccggctcggtcatgcccgacgccgtcttt
tccaacatcggcaagctgctgctcgccaccaagatctacgacatgcaccgcgtcgcccac
tacgtctccggcggcctgatcgtggcgctgccggggccggacgaggatcacaaccccgaa
acccgcgccgacctcaccgccgtgctcggcggccgccccgacatccccgccgagcgccgg
atggaaatctcccgcatgatcgaagacctcaccgtctccaaccagggcaactggtactcg
gtcatctcgctccacggcggcggctcgcccgaagccatgaagcgcgagatctggcgcaat
taccccgtcgccgaacggcaggagctcgtctccgacctgatggaccgcggcgttctggcc
gaaggccgcaaggtctcccgccagcccggccgttgctgcgccaccggctgccagccgccc
gagaaaatctccaacaccgaagccgcggaataa
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