Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0582
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Entry
Rmag_0582 CDS
T00438
Name
(GenBank) Outer membrane protein-like protein
KO
K12340
outer membrane protein
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma01501
beta-Lactam resistance
rma01503
Cationic antimicrobial peptide (CAMP) resistance
rma02020
Two-component system
rma03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Rmag_0582
09132 Signal transduction
02020 Two-component system
Rmag_0582
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rmag_0582
01503 Cationic antimicrobial peptide (CAMP) resistance
Rmag_0582
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rma02000
]
Rmag_0582
02044 Secretion system [BR:
rma02044
]
Rmag_0582
01504 Antimicrobial resistance genes [BR:
rma01504
]
Rmag_0582
Transporters [BR:
rma02000
]
Other transporters
Pores ion channels [TC:
1
]
Rmag_0582
Secretion system [BR:
rma02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Rmag_0582
RTX toxin transporter
Rmag_0582
Multiple protein transporter
Rmag_0582
RaxAB-RaxC type I secretion system protein
Rmag_0582
Antimicrobial resistance genes [BR:
rma01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Rmag_0582
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Rmag_0582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SH3BGR
Motif
Other DBs
NCBI-ProteinID:
ABL02333
UniProt:
A1AWM6
LinkDB
All DBs
Position
complement(633947..635338)
Genome browser
AA seq
463 aa
AA seq
DB search
MKKNLTTALIFITCLDVQAITQNEFIKRLKDTHPFFTQLDLSVQIKKIDQQATTANQDWI
VSVNTNFKSEDVNNISSITTYNNLNTTLVDFSATKKIVSLGANITLKHSWKDKNKATTAS
LNTNRNKFSIDYVHPLLKNASGINDRLNIDLSNIDIQISKLEATEQQEVFILTQLKKFID
LAYAQVRLMINNQRLNLAIQELTLVKQKFTMLVVDKVDVLLQEDAYQSAKQQQLQAQQDL
NILRHEMAITLDISFSDVKAEFDLYQRYTTNDDNLKQYLLTNSRILKIADLSQDLLKRQL
KSDRNNSKVQLDLKFGISSEGEDSRYIDSIFNQSPSWNIGLELSYPIGSTQAKSTIEKTQ
IKLARAKEQKQEKLLNIHAKAKALKQKIQYLVEILESNKMQIKIAKARTKEEKRRYNNTN
SQTSFVISAQNNEQSVNLNHIQVAKKYQQSVLDFKATIDQLLP
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacctaacgactgcgttgatttttattacttgtcttgatgttcaagcaata
acacaaaatgaatttattaagcgtttaaaagatacgcatcctttttttacacagcttgat
ttatctgtacaaattaagaaaattgatcaacaagcaaccacggctaatcaagattggatc
gttagcgtaaacactaattttaagagtgaagatgtgaataatatttcatccataacgact
tataataatttaaataccactttagttgatttttcagcaactaaaaaaatagtaagttta
ggtgctaatattactctcaagcatagttggaaagataaaaataaggctacaactgccagt
ttaaacaccaatagaaataaattttctattgattatgttcatccacttttgaaaaatgca
agtggtattaatgatcgtctaaatatagatttatctaatattgacatacaaatatctaag
cttgaagctactgagcaacaagaggtttttatacttacccaactaaaaaaatttattgat
ttagcttatgctcaagtgcgtttaatgattaataatcaacggctaaatttagccattcaa
gaattgactctggttaaacaaaaatttaccatgttagtcgttgataaggttgatgtattg
ttacaagaagatgcttatcaaagtgctaaacagcaacaacttcaagcccagcaagattta
aatattttgcgccatgaaatggccattactttagacattagtttttctgatgttaaagct
gaatttgatttatatcaacgctatacaactaatgatgacaatcttaaacaatatttgtta
actaattctagaatattaaaaatagctgatttaagtcaagacttactaaaacgtcaacta
aagagtgacagaaataattcgaaagtacaacttgacttgaaatttggtattagtagtgaa
ggtgaagatagtcgttatatagattctatttttaatcaaagtccatcgtggaatattggt
ttggagttgagttatcctattggtagtacgcaagccaagtcgaccattgaaaaaacacaa
ataaaacttgctagagctaaagagcaaaagcaagagaaattattaaacatccatgccaaa
gcaaaagcattaaagcaaaaaattcagtatttggtggaaatacttgaatccaataaaatg
caaatcaaaattgccaaggcgcgcactaaagaggaaaaacgaagatacaacaacaccaac
tctcaaacaagttttgttatttcagcacaaaacaatgagcaaagtgtaaatcttaaccac
atccaagtagcaaaaaaatatcaacaatcagtgcttgatttcaaggcgactattgatcaa
ttattgccatga
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