Rattus norvegicus (rat): 300338 Help Entry 300338            CDS       T01003                                  Symbol Mmp1b Name (RefSeq) interstitial collagenase B   KO K01388   matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7] Organism rno  Rattus norvegicus (rat) Pathway rno03320   PPAR signaling pathway rno04657   IL-17 signaling pathway rno04926   Relaxin signaling pathway rno05171   Coronavirus disease - COVID-19 rno05200   Pathways in cancer rno05219   Bladder cancer rno05323   Rheumatoid arthritis rno05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:rno00001]  09150 Organismal Systems   09151 Immune system    04657 IL-17 signaling pathway     300338 (Mmp1b)   09152 Endocrine system    03320 PPAR signaling pathway     300338 (Mmp1b)    04926 Relaxin signaling pathway     300338 (Mmp1b)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     300338 (Mmp1b)   09162 Cancer: specific types    05219 Bladder cancer     300338 (Mmp1b)   09172 Infectious disease: viral    05171 Coronavirus disease - COVID-19     300338 (Mmp1b)   09163 Immune disease    05323 Rheumatoid arthritis     300338 (Mmp1b)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     300338 (Mmp1b)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:rno01002]     300338 (Mmp1b) Enzymes [BR:rno01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.24  Metalloendopeptidases     3.4.24.7  interstitial collagenase      300338 (Mmp1b) Peptidases and inhibitors [BR:rno01002]  Metallo peptidases   Family M10    300338 (Mmp1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_M10 Hemopexin Metallopep Reprolysin_5 Reprolysin_4 PG_binding_1 Peptidase_M54 Reprolysin_3 DUF4953 Motif Other DBs NCBI-GeneID:  300338 NCBI-ProteinID:  XP_038938724 RGD:  1306843 Ensembl:  ENSRNOG00000008881 LinkDB All DBs Position 8:complement(12882699..12891125) Genome browser AA seq 418 aa AA seqDB search MQAKNVDVKEVMDEKLRQMEQSFGLKVTGNSNSETPSAIKTPMCGVPDVTPYSITYNNTQ WTKTHLTYSILNYTPHLPRKVVEDAIERAFKVWSDVTPLTFERVFEEEGDIVLSFHQGDH GDLYSFNGSKSHFAHAFPPGPGLGGDVHYDLDETWTNNSDNFNLFYVTAHELGHSLGLSH SKDEEALMFPSYTWNNKDFVLNQDDISKIQALYGPSPNPIQPTDATPDPCSSGLTFDAIT TYRGEVIFFKDRFYIRVISFLPKPLINVIDLIWPDLPSKIDAAYEASLVDELRFFKGNKV WAVQEQNVLRGFPTDIHSFFGFPSSVTHIDAAVCEEETGKTYFFVDNMYWRYDENTRSMD PGYPRLIAEDFPGIDDKVDDVFQKEDNFYFFHQSTQHIFNLQTRKIVDAPDSSSWFNC NT seq 1257 nt NT seq  +upstreamnt  +downstreamnt atgcaagctaaaaacgtggatgtcaaggaggtgatggatgaaaagctgagacaaatggag cagtcatttgggctgaaagtgacaggaaattcaaattctgaaaccccgagtgctatcaag acacccatgtgtggggtgcctgatgtgaccccatattcaattacttataacaatactcag tggaccaaaacacatctgacttacagcattttaaactacacaccacatttgccaagaaaa gttgtggaagatgccattgagagagcctttaaagtctggagtgatgtgacaccactaaca ttcgaaagggtctttgaggaggaaggagatattgtgctctccttccaccaaggagaccat ggtgacctttactcatttaatggatctaaatcccactttgcccacgcttttccgccaggc ccaggtttggggggcgatgttcattatgatctggatgagacgtggaccaacaacagtgac aatttcaacttgttctacgttacagctcatgaactgggccactcccttggactctcccat tctaaggatgaagaggcactaatgttccccagttacacatggaacaataaagactttgta ctaaaccaggacgatattagtaaaatccaggctttatatgggccttccccaaatcctatc cagccaacagatgccacaccagatccatgtagtagtggtctgacctttgatgctataacg acatatcggggggaggtgatattctttaaagacaggttctacattcgtgtaattagcttc ctgccaaaacctttgatcaatgtgatagatcttatctggccagatttgccaagtaaaatt gatgctgcttatgaagctagtttggtagatgagctccgctttttcaaaggcaataaagtc tgggctgttcaggaacagaatgtactgagaggattccccacagacatccacagcttcttt ggcttccctagcagtgtgacacacattgacgctgccgtttgtgaggaagagactggaaaa acatacttcttcgttgacaacatgtactggaggtatgatgaaaatacacggtccatggat ccaggttaccctagattaatagcagaagactttcctggaattgatgataaagttgatgat gttttccagaaagaggataatttctatttctttcaccaatcaactcaacacatttttaac ctccaaacaagaaaaattgttgatgcccctgattctagttcctggttcaactgctaa

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