Rahnella sikkimica: BV494_01040
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Entry
BV494_01040 CDS
T05331
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
rox
Rahnella sikkimica
Pathway
rox00680
Methane metabolism
rox00720
Other carbon fixation pathways
rox01100
Metabolic pathways
rox01120
Microbial metabolism in diverse environments
rox01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
BV494_01040
00680 Methane metabolism
BV494_01040
Enzymes [BR:
rox01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
BV494_01040
1.17.98.5 hydrogen-dependent carbon dioxide reductase
BV494_01040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Tex_YqgF
PLD_C
Motif
Other DBs
NCBI-ProteinID:
AVF33591
UniProt:
A0A2L1UKZ2
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All DBs
Position
complement(219656..221827)
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AA seq
723 aa
AA seq
DB search
MKKVTTVCPYCGAGCKLNLVVDNGKIIRAEAANGVTNQGELCLKGYYGWDFLNDTKLLTP
RLTQPLIRRQKGGKFEAVTWDEAIRYTAQRLKEIKQKHGPRSIMHTGSSRGTGNETNYVM
QKFARAVIGTNNVDCCARVCHGPSVAGLQATLGNGAMSNSIGDIENSKCLLVIGYNCADS
HPIVARRVIKAKEKGAQIIVCDPRRIETARIADQHLQIKNGCNMALVNAFAHVLIEENLY
DHDYVAKYTEGFEEYRKNVADYSPEAVAEQTGVSAQQIRQAMRTYAAAPSATIMWGMGVT
QFGQAVDVVKGLAGLALLTGNLGRANVGVGPVRGQNNVQGACDMGVLPNEFPGYQSVTDP
KVRAKFADAWGIDVNQMDTEIGHRITEIPHLAIEGHVKAYYIMGEDPLQTEADLSLVRKG
FEALEFVVVQDIFMTKTAEQADVILPATSWGEHGGVFSCADRGFQRFEKAIEPKYNVKRD
WEIISLLATELGYPMHYNDNQEIWDEMRSLCPLFYGATYEKMGELGHIQWPCTTLESPGT
QYLYADNRFDTPTGKGQLFAAPWRAPAEVPDDSYPLVLCTVREVGHYSCRSMTGNCAALQ
TLADEPGFVQMHPQDAEALGIRDQQLVWVASRRGKVISRANFNERINTGAVYMTYQWWIG
ACNELTQENLDPISKTPETKYCAVKVEQIADQRWAENYAQQTYSDMKARLRSAVEDVIPV
VEV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtcaccactgtctgcccgtattgcggggccggatgtaaattgaatctggtt
gtggataacggaaaaatcattcgcgccgaagccgccaacggcgtcaccaatcagggcgaa
ctctgtctgaaaggttattacggctgggatttcctgaacgataccaaactgctgaccccg
cgcctgacgcagccgctgatccgccgccagaaaggcggaaaattcgaagccgttacctgg
gatgaagcaatccgctataccgcgcagcgcctgaaagaaatcaaacaaaaacacggcccg
cgttccatcatgcacaccggttcttcccgtggtaccggcaacgaaaccaactatgtgatg
cagaaatttgcccgtgcggtcatcggcaccaacaacgtcgactgctgcgcccgcgtgtgt
cacggcccgtccgttgccggtttgcaggccacgctcggtaacggcgcgatgagtaactcc
atcggcgatatcgaaaattccaaatgcctgctggtgatcggctataactgcgcggattcc
cacccgatcgtcgcgcgccgcgtgattaaagccaaagagaaaggcgcacagattatcgtc
tgtgacccgcgccgtatcgaaaccgcccgcattgccgatcagcatctgcaaatcaaaaac
ggctgcaacatggcgctggtgaatgcgttcgcccatgtgctgatcgaagaaaatctgtat
gaccatgactacgtggcgaaatacaccgaaggcttcgaggaataccgcaaaaacgtcgcc
gattattcaccggaagcggttgccgaacagaccggcgtttccgcgcagcaaatccgtcag
gcgatgcgcacctacgccgctgccccgtctgccaccatcatgtggggcatgggcgtgact
cagtttgggcaggctgtggatgtggtgaaagggctggccggactggcgctgctgaccggt
aatctgggccgcgccaacgtcggcgtcgggccggttcgcgggcaaaataatgtgcagggt
gcctgtgatatgggcgtgctgccgaatgaattccccggctatcagtcggtcaccgacccg
aaagtgcgtgcgaaattcgccgacgcgtggggcattgacgttaaccagatggacacggaa
atcggccaccgcatcaccgaaatcccgcacctggcgattgaaggccatgtgaaagcctat
tacatcatgggcgaagatccgctccagaccgaagccgatttgagtctggtacgtaaaggc
ttcgaggcgctggaatttgtggtggtgcaggacattttcatgaccaaaacggcggaacag
gccgacgtcattttacccgccacgtcatggggtgagcatggcggcgtgttctcctgcgcc
gaccgtggcttccagcgttttgaaaaagccatcgaaccgaaatacaacgtcaaacgcgac
tgggaaatcatcagtcttctggcgacagaactcggttatccgatgcattacaacgataac
caggaaatctgggacgaaatgcgcagcctgtgcccgctgttctacggcgcaacttacgaa
aaaatgggcgaactcgggcacattcagtggccttgtaccacgctggaaagtccggggacg
cagtacctttacgcggacaatcgcttcgatacgccaaccggtaaaggccagctgtttgcc
gcaccgtggcgcgcaccggcagaagtgccggatgacagttatccgctggtgctgtgtacc
gtccgcgaagtcggccactattcctgccgttccatgaccggcaactgcgccgccttgcaa
acgctggccgacgaaccgggcttcgtgcagatgcacccgcaggacgccgaagcgctgggc
atccgcgaccagcaactggtctgggtcgcctcgcgccgtggcaaagtcatttcacgcgct
aacttcaatgaacgcatcaataccggcgcggtgtacatgacttatcagtggtggatcggg
gcctgtaatgaactgacgcaggaaaatttggatccgatttccaaaacgccggaaaccaag
tattgcgccgttaaagttgaacagatcgccgaccagcgctgggcggaaaactacgcacag
caaacctacagcgacatgaaagcgcgcctgcgcagtgccgttgaagatgtgatcccggtg
gtggaagtgtag
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