Rahnella sikkimica: BV494_20020
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Entry
BV494_20020 CDS
T05331
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
rox
Rahnella sikkimica
Pathway
rox01501
beta-Lactam resistance
rox01503
Cationic antimicrobial peptide (CAMP) resistance
rox02020
Two-component system
rox03070
Bacterial secretion system
Module
rox_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BV494_20020
09132 Signal transduction
02020 Two-component system
BV494_20020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BV494_20020
01503 Cationic antimicrobial peptide (CAMP) resistance
BV494_20020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_20020
02044 Secretion system [BR:
rox02044
]
BV494_20020
01504 Antimicrobial resistance genes [BR:
rox01504
]
BV494_20020
Transporters [BR:
rox02000
]
Other transporters
Pores ion channels [TC:
1
]
BV494_20020
Secretion system [BR:
rox02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BV494_20020
RTX toxin transporter
BV494_20020
Multiple protein transporter
BV494_20020
RaxAB-RaxC type I secretion system protein
BV494_20020
Antimicrobial resistance genes [BR:
rox01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
BV494_20020
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
BV494_20020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AVF37052
UniProt:
A0A2L1UVR5
LinkDB
All DBs
Position
complement(4335261..4336748)
Genome browser
AA seq
495 aa
AA seq
DB search
MKKLLPLLIGLSLGGFSTISQAENLMQVYQQARTSNPDLRKSAADRDAAFEKINESRSPL
LPQLGLGADYGYTNGYRDANGVNSDVGSASLQLTQTLFDMSKWRALTLQEKTAGIQDVSY
QTDQQSLILNSATAYFNVLSAIDSLSYTEAQKQAIYRQLDQTTQRFNVGLVAITDVQNAR
SQYDTVLANEVTARNNLDNALEALRQVTGVYYPQLSSLNVDNFNTTRPQPVATLLKEAES
RNLSLLSARLSQDLAREQIRYAETGHMPTVDLTASTGISNTKYHGDKTGGSSSYQDADAG
QNKIGLSFSLPLYSGGSVTSQVKQAQYSFVGASEQLESAHRSVVQTVRSSFNNISASISS
INAYKQAVVSAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSSARYTYLINQLNI
KSALGTLNESDLLALNGALGKPVPTAPDQVAPETPQQDATADGYGNNTASAPRTEKASAT
TQTHTTKKSGNPFQN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactgctcccccttctcatcggactcagcctgggcggcttcagtacgataagc
caggccgaaaacctgatgcaggtctatcagcaagccaggacgagtaacccggacctgcgc
aaatccgctgctgaccgggatgctgcattcgaaaaaatcaacgaaagccgcagtccttta
ttaccgcaactcggattgggtgcggattatggttataccaatggctaccgcgatgcgaat
ggcgttaatagtgatgttggcagcgccagcctgcaattaacgcagaccctttttgatatg
tcaaaatggcgcgccctgaccttgcaggaaaaaactgccggtattcaggacgtgtcttat
cagactgaccagcaatccttaatcctgaattctgcgacggcttatttcaacgtattgagt
gctattgattcactctcttataccgaagcgcagaaacaggcaatttatcgtcagttggat
caaaccacgcagcgttttaacgtcggcctggttgccatcaccgacgtccagaacgcccgt
tcacaatacgacaccgtattagcgaacgaagtgactgcccgtaataatctggataacgcg
ctggaagcactgcgtcaggtgaccggcgtttactatccgcagttgtcgtccctgaatgtg
gataacttcaacaccacgcgtccgcaaccggtcgccacgttgctgaaggaagccgaaagc
cgcaacctgagcttgctgtctgcgcgtctgtcacaagatctggcacgtgagcaaatccgt
tatgcggaaaccggccacatgccaacggttgatctgaccgcgtctaccggcatcagcaac
acaaaatatcacggcgacaaaaccggcggttcgtccagctatcaggacgccgatgcgggt
cagaacaaaatcggcctgagcttctcactgccactgtacagcggcggttctgtaacgtct
caggtgaaacaggctcagtacagctttgtgggtgccagcgagcagcttgaaagcgcgcac
cgcagcgttgttcagaccgtacgttcttccttcaacaacatctcggcctctatcagcagc
atcaacgcctataaacaagccgttgtttctgcacagagttctttggatgcgatggaagcc
ggttatcaggtcggtacccgtacaatcgttgacgttctggatgcgaccaccacgctgtat
aacgccaaacaacaactttccagcgcccgttacacgtacctgatcaaccagctgaacatc
aaatcagcgctgggtacactgaacgaaagcgatctgctggcactaaacggtgctctgggt
aaacctgtgccaacggcaccggatcaggtcgcacctgaaaccccgcagcaggacgctacg
gcggacggctatggcaacaacaccgcgtctgcaccgcgtactgaaaaagccagcgcaacg
acccaaacgcataccacgaagaaaagcggcaaccctttccagaactaa
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