Rahnella sikkimica: BV494_20955
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Entry
BV494_20955 CDS
T05331
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rox
Rahnella sikkimica
Pathway
rox01501
beta-Lactam resistance
rox02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BV494_20955
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BV494_20955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_20955
01504 Antimicrobial resistance genes [BR:
rox01504
]
BV494_20955
Transporters [BR:
rox02000
]
Other transporters
Pores ion channels [TC:
1
]
BV494_20955
Antimicrobial resistance genes [BR:
rox01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BV494_20955
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BV494_20955
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BV494_20955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AVF37215
UniProt:
A0A2L1UWB6
LinkDB
All DBs
Position
complement(4531627..4533039)
Genome browser
AA seq
470 aa
AA seq
DB search
MNKPHFALSVIGAFSLTLLAGCTLEPKYQRPALPVASNWSAGNGADTRTGQDIGWKAFFN
EPAMKQLITMSLENNRDLRVAALNVDTARASFQIDRAALLPTLDATAGETSQHLPGGLYS
TQTSGPVTYQQYSANLGVTSYEVDLFGRVRSLRDQGLETYLATEATQRATQITLVSEVAS
GYLSLAADNDLLKLAINTANSQNKSYDLTKRSYDSGISTSQDLVQAETTVRAAQADIAQY
TRQVRQDVNALTLLVGTTIPQNLLAGATLQQDWKFPQTPAGLPSDLLTRRPDIIAAEHTL
KAANANIGAARAAFFPSITLTGTAGSESGSLSKLFDGGTGAWSFMPSINIPIFDGGVNQA
NLDIAKDTKKIDIANYEKAIQTAFKEVSDGLAGEATYKDELLARTQDADANQRNYDLSQM
RFKGGIDNYLSVLVAQRSLYSAQQTLITTQLAQLNQDISLYKALGGGWKE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccgcatttcgcgctgtccgtgattggcgcgttttcactcaccctgctggcg
ggctgtacgctggaaccgaaatatcagcgtcctgccctgccggtcgccagcaactggagc
gccggaaacggcgctgacacccgcaccgggcaggatatcggctggaaggcgttcttcaat
gaaccggcgatgaagcagctgatcacgatgtccctcgaaaataaccgcgatttacgggtc
gcggcgttaaacgtcgatacggcgcgggcctccttccagattgaccgcgccgcgctgctg
ccaacgctcgatgccaccgccggggaaaccagccagcatctgccgggcgggttgtattcc
acgcaaacctcggggccggtgacgtatcagcaatacagcgccaatctcggcgtgacgtct
tatgaagtggatctgtttggccgcgtgcgcagcctgcgcgatcaggggctggaaacctat
ctcgccactgaagcgacgcagcgcgccacgcaaatcacgctggtttctgaagtggcttcc
ggctatctgagcctggcggcggataacgatctgctcaaactggcgattaacaccgccaac
agccagaacaaatcctacgatctgaccaaacgcagctacgattccggcatcagcacctca
caggatctggtgcaggcggaaaccaccgtgcgggcggcgcaggccgatatcgcgcaatac
acgcgtcaggtacgtcaggacgtcaatgcgctgacattgttagtcggcacgacgatcccg
caaaacctgctggccggtgccacgctgcaacaggactggaaattcccgcagacgcccgcc
ggtttaccgtctgatctgctgacccgtcgcccggatatcattgcggcggaacacacgctg
aaagccgccaacgccaacattggcgccgcccgcgcggcgttcttcccaagcattacgctg
accggcaccgccggttctgaaagcggcagcctgagtaaactcttcgacggcggcacaggc
gcatggtcattcatgccatcaattaatatccccatctttgacggcggcgtgaatcaggcg
aatctcgacattgccaaagacactaagaaaatcgacatcgccaactatgagaaagccatt
cagacggcgttcaaggaagtgtccgacggtttagccggagaagcgacctacaaagacgaa
ctgctggcccgcacacaggacgccgacgccaaccagcgcaactacgatctctcgcagatg
cgtttcaaaggcggcatcgacaactatctgagcgtactggtcgcgcaacgttcgctgtat
tccgcacagcaaacgctgatcacgacccaattagcccagctgaatcaggacatcagtttg
tataaagcgctgggcggtggctggaaggagtaa
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