Ralstonia pickettii 12D: Rpic12D_4293
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Entry
Rpic12D_4293 CDS
T00925
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf01501
beta-Lactam resistance
rpf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpic12D_4293
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rpic12D_4293
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpf02000
]
Rpic12D_4293
01504 Antimicrobial resistance genes [BR:
rpf01504
]
Rpic12D_4293
Transporters [BR:
rpf02000
]
Other transporters
Pores ion channels [TC:
1
]
Rpic12D_4293
Antimicrobial resistance genes [BR:
rpf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Rpic12D_4293
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Rpic12D_4293
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Rpic12D_4293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACS65536
UniProt:
C6BN78
LinkDB
All DBs
Position
2:complement(897947..899452)
Genome browser
AA seq
501 aa
AA seq
DB search
MTRGTQALRTSLLALAACALVSACAVGPDYKRPDAEVPQQYKEAGDWKVADPSDAIARGK
WWEIFNDPQLNALEEQVAAANQNILVAEAQYRQAQALVQSAQASFFPTLGANASATRSRS
VRTSVNPDGSLSTGNPSLLNSQSLSLNASWELDLWGRIRRTVESNKASAQASAGDLSSAL
LSAQATLAQNYFQLRVTDTQKAVLQRTVANYERFLKLTQNQYAVGVAQRSDVLTAQTQLK
QSQALLLDTEVTRAQLEHAIAVLIGKPPAEFSLAPATAASAADLPALPAIPLEVPSAVLE
RRPDIAAAERRMAAVNAQIGVAKAAYFPTLTLGASAGLAANTLTRLATLPSRVWSIGPTL
AATLFDGGARAAAVDKAGAAYDASVATYRQTVLGAFQDVEDNLAALRWQTQEFGVQADAV
KAAQEAAQLNLNRYRAGTVSFLEVITAQATAYSAERTLLTLQGKQYSAAVLLVKALGGGW
HGEVPVVGKAALQPASTPAAQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaggcactcaagccctccgtacctcgttgctcgcgctggccgcgtgcgcactc
gtctccgcctgcgcggtcgggcccgattacaagcgccccgatgccgaagtgccgcagcaa
tacaaggaagccggcgactggaaagtcgccgatccgagcgacgccattgcccgcggcaag
tggtgggagatcttcaacgacccgcaactgaacgcgctggaagaacaagtggccgccgcc
aatcagaacatcctggtggccgaggcgcagtaccgccaggcccaggcgctggtgcaatcg
gcacaggcttcgttcttcccgacgctgggtgccaatgcgtcagccacgcgcagccgttca
gtgcgcacgtcggtcaacccggatggcagcctgtcgaccggcaacccaagcctgctcaat
tcgcagagcctgtcgctcaacgccagctgggaactggacctgtggggccgcatccgccgg
acggttgagtcgaacaaggcgagcgcgcaagccagcgcaggcgacttatcgtccgctttg
ctgtcggcacaggcgacgcttgcgcagaattattttcaattgcgtgtcacggatacccag
aaagccgtcttgcaacgcacggtggcgaactacgagcgcttcctgaaactcacgcaaaac
cagtacgccgtgggcgtggcgcagcgttccgacgtgctgaccgcgcagacgcaactcaag
cagtcgcaggcgctgctgctggataccgaagtcacgcgggcgcagcttgagcacgccatt
gcggtgctgatcggcaaaccgccggcggagttctcgctggccccagccactgctgcgagc
gccgccgacctgccggccctgcctgccattccgctggaagtgccatcagcagtgctggag
cgccgtcccgacatcgccgccgccgagcgacgcatggccgctgtcaacgcgcagatcggc
gtggccaaggccgcgtacttcccgacgcttacgctgggtgcctcggccggcctggcggcc
aacacgctcacgcgcctggcaacactgcccagccgcgtctggtcgatcggcccaaccctg
gcagcgacgctgtttgatggcggcgcgcgtgcagccgccgtcgacaaggccggcgctgcc
tacgatgcgtccgtcgcaacgtaccgccagaccgtgctgggggccttccaggatgtcgaa
gacaacctggccgcgctgcgctggcaaacgcaggaatttggcgtacaggccgatgccgtc
aaggccgcgcaggaagccgcgcagctcaacctgaaccgctatcgcgcgggcaccgtgagc
ttcctggaagtcatcacagcacaggccacggcctacagcgccgagcgcacgctgctcacg
ctgcagggcaagcagtattcggcagcggtgctgctggtgaaggcgctgggcggtggctgg
cacggcgaagtaccggtggtcggcaaggcagcgctgcagccggcatccacgccagccgcg
caataa
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