Runella slithyformis: Runsl_1400
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Entry
Runsl_1400 CDS
T01553
Name
(GenBank) Vinylacetyl-CoA Delta-isomerase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
rsi
Runella slithyformis
Pathway
rsi00650
Butanoate metabolism
rsi00720
Other carbon fixation pathways
rsi01100
Metabolic pathways
rsi01120
Microbial metabolism in diverse environments
rsi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Runsl_1400
09102 Energy metabolism
00720 Other carbon fixation pathways
Runsl_1400
Enzymes [BR:
rsi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
Runsl_1400
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
Runsl_1400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Motif
Other DBs
NCBI-ProteinID:
AEI47826
UniProt:
A0A7U3ZIH3
LinkDB
All DBs
Position
complement(1593476..1594993)
Genome browser
AA seq
505 aa
AA seq
DB search
MKPSTIKIQTSQDYYESLKGRRLKVYLFGELVEEPSEHPMIRPSVNAVAETYDLALREPE
LASVISPFTGERINRFLHISTSANDLVLQNKMQRKLGQNTGTCFQRCVGMDAFNALFSTT
FEMDKKYQTPYHERFVAFLTEMHRRNFVIGGAMTDVKGDRSKAPHEQADPDLFVHITRRT
SEGVYITGAKAHQTGCLNSHWLLVMPTMRLGEKDKDYAIVGAVPVEAPGITYIYGRQSCD
TRSMEGGSMDAGNANFGGQEAMVIFEEVFIPNPLIFMDGEYEFASMLVERFTCYHRRSYV
CKSGVGDVLIGAAANIAEMNGADKASHIKDKLVEMTHLNETIYGTGIAASYQGYATESGA
YLPDDMLANVCKHHVTRFPYEISRLAQDLAGGLMVTLPSEQDYNNPETHELLKKYLKGKP
NIPTEDRFRMFRLIENMTLGRNAVGYLTESMHGAGSPQAQRIQIARFMQLEYKKRLAKVL
AGIEVIDTEAMVEEAGSYFGRVFEI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttcaactattaaaatccaaacctcccaagactactacgaaagtctcaaaggc
cgccgactgaaagtgtatttgtttggagaattggtggaagaaccttccgagcatcccatg
attcgtccgtcggtgaatgccgtggcggaaacctatgatttggcccttcgggaacctgaa
ttggcgtcggtgatttcgccttttacgggcgagcgcatcaatcgctttctgcacatttcg
acgagtgccaatgatttggtgctgcaaaacaaaatgcaacgcaaactcgggcaaaatacg
ggcacttgctttcagcgttgcgtaggaatggatgcgttcaatgcgctgttttcaacaacg
tttgaaatggacaaaaaataccaaacgccttaccacgagcgctttgtggcttttttgacc
gaaatgcaccgtcgtaattttgtcatcggaggtgccatgaccgacgtgaaaggcgatcgc
agcaaagctccgcacgagcaggccgacccggatctgtttgtccacatcacccgccgcact
tccgaaggcgtgtacatcacgggagccaaagcgcaccaaacgggctgtctcaattcgcat
tggctactggtgatgcccaccatgcgattgggcgaaaaagacaaagactatgccatcgta
ggcgcggtacccgtggaggcaccgggcatcacgtacatctacggccgacaatcgtgcgat
acacgcagcatggaaggtggcagtatggacgcgggaaatgccaacttcggcggacaggaa
gcgatggtgatctttgaggaggtattcattcctaatcccctgattttcatggacggtgaa
tacgaatttgcgtcgatgttggtggagcgttttacgtgttatcaccgtcggagttacgtc
tgcaaaagcggcgtgggcgatgtgctgatcggggcggcggccaacattgccgaaatgaac
ggagccgacaaagcgagccacatcaaagacaaattggtagaaatgacccatctcaacgaa
accatttacggcacgggcatcgcggcttcgtaccaaggctacgccaccgagtcaggggcg
tatttacccgatgacatgcttgccaatgtctgcaaacaccacgtgacgcgcttcccctac
gagatcagccgtttggcgcaggatttggcgggcggattgatggtcacgctgccttccgag
caggattacaacaaccccgaaacccacgaattgctcaaaaaatacctcaaaggaaaaccc
aacataccgacggaagaccgttttcgcatgtttcgcctcatcgaaaacatgaccttgggc
cgcaatgccgtgggctacctcaccgagtccatgcacggagccggttcgccccaggcccaa
cggattcaaatagcgcgtttcatgcagttggaatacaaaaaacgtctcgccaaagtattg
gcagggattgaagtgattgataccgaggctatggtggaagaggcggggagttattttggg
cgggtatttgagatttga
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