Runella slithyformis: Runsl_1794
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Entry
Runsl_1794 CDS
T01553
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rsi
Runella slithyformis
Pathway
rsi01501
beta-Lactam resistance
rsi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Runsl_1794
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Runsl_1794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_1794
01504 Antimicrobial resistance genes [BR:
rsi01504
]
Runsl_1794
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_1794
Antimicrobial resistance genes [BR:
rsi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Runsl_1794
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Runsl_1794
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Runsl_1794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6847
4HFCP_synth
YARHG
Motif
Other DBs
NCBI-ProteinID:
AEI48218
UniProt:
A0A7U3ZJ98
LinkDB
All DBs
Position
2030873..2032297
Genome browser
AA seq
474 aa
AA seq
DB search
MLNYVGVALVALTYTACTVPTLVQKTEHKLTAVSYTDSQSADSVNTAKVSWKDYFTDPYL
IALIDTAFKNNQELNITLQEMEIARNEIMARRGEYLPFVGYGATAGVEKAARYTQVGASE
ANIEIKPERETPEPLPNFGGGLYARWEVDIWHKLRNARKAAATRYLATVEGKNFMLTNLV
AEIARSYYELRALDSQLEIVRQNIEIQNNALKIVKLEKESTRVTELAVRRFQAQVLNTQS
LQYGIQQRIIETENRINFLLGRYPQPILREKGNFETLIPTLARAGIPSQLLENRPDIKQA
ELQLEASKIDVQVARANFYPSLGISGSLGLQAFNPLYLAKMPQSLLASMIGDLAGPLINK
NAITATYYNANAKQIQAIYNYEKTVLNAYIEVVNQLSNIDNLGKSFELKANEVQALTQSI
TISNNLFRSARADYMEVLLTQRDALESRFDLIETKMQQMNAAVNIYRAMGGGWN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgctgaattacgtcggggtagctttggttgccctgacgtatactgcctgtactgtgcct
accttggttcagaaaacagagcataaactgactgctgtgagttatactgactcgcagagc
gctgattcggtaaatactgccaaggtgtcgtggaaggattattttaccgatccctacctg
attgcgctgattgataccgcttttaaaaacaatcaggagctgaatattaccttgcaggaa
atggagattgcccgcaacgagatcatggcccgaagaggggaatacctgccttttgtgggg
tatggcgcaacggccggggtcgaaaaggccgcccggtatacacaggtgggagccagcgag
gcaaacattgaaataaaaccggaaagagagaccccggagcctttgcccaactttggcggc
gggctttatgcgcgatgggaagtcgatatttggcacaaactgcgcaatgcgagaaaggcg
gcagcaacccgctatttggcaacggttgagggaaaaaatttcatgctgaccaatctggtg
gccgaaattgcccgctcttattatgaattacgagcccttgacagccaattggagatcgtg
cgccaaaatattgaaattcaaaacaatgcacttaaaatagtaaaactggagaaagaatct
acgcgggtgacggaactggccgtgcggaggtttcaggcgcaggtactcaacacgcaaagt
ctgcaatacggtattcagcaacggattatcgaaaccgaaaacaggatcaattttctgtta
ggtaggtatccgcagcccattctcagagaaaaagggaattttgaaacgctcatccccacg
cttgcccgtgcgggtatcccttctcaattgttggaaaaccgacctgatattaagcaggct
gagttgcagttggaggcaagcaaaatagatgtgcaggtggccagagcgaatttttaccca
tcgttgggtatttcgggcagtttgggacttcaggcatttaatccgctctatttggcaaaa
atgcctcaatcgttgctggcctctatgataggagatttggcagggcctctgatcaataaa
aatgcgataaccgccacgtattataatgccaatgccaaacagatacaggccatttataat
tacgaaaaaacggtcctgaacgcctatattgaggtcgtcaatcagttgtcaaacattgat
aatctgggaaaaagctttgagttaaaagcaaatgaagtacaggcgcttacccagtctatt
actatctcaaataaccttttcaggtctgcaagggcagactatatggaagtgcttttgaca
caacgggatgcgcttgagtcgcgatttgatttgatagaaaccaaaatgcagcaaatgaat
gccgcggtcaatatttaccgtgccatgggcggcggatggaattaa
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