Runella slithyformis: Runsl_2816
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Entry
Runsl_2816 CDS
T01553
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rsi
Runella slithyformis
Pathway
rsi01501
beta-Lactam resistance
rsi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Runsl_2816
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Runsl_2816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_2816
01504 Antimicrobial resistance genes [BR:
rsi01504
]
Runsl_2816
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_2816
Antimicrobial resistance genes [BR:
rsi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Runsl_2816
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Runsl_2816
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Runsl_2816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AEI49208
UniProt:
A0A7U3ZL47
LinkDB
All DBs
Position
3276140..3277576
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AA seq
478 aa
AA seq
DB search
MIIARFIVISFLCIWASSCKAPSIVFNTNPLQPLPTQYTDQMPNAGSAEQSWRTFFKDSL
LISLIDTALVHNLDLLRMQQRIAVFDAQVLQAQGRLRPFVAGTGSVGMRRFGKYTMDGVG
NFDTNFSTNISSSQRVPEYLPDFFWGVQSSWEIDIYKKLRNQRQAAISRYMATLEGRNLL
ITHLVSDIANTYYDLISSDLELDFIRATIMLQRSQLDLIRLEKEAGRSTELAVQQFEAQL
LNAQALEKELLQQINFDESRINFILGRFSKPVVRNKISFTQLTLPSIDRGSPADLLKNRP
DIRRAEYEVMAAKADVAAARAAFLPSLNLGGSLGFQAFNPRFILSPHSIAFNLLGGITAP
LVNKTAIQAEFNVRKASQLDALYNYQQTILNGYLEVHNQWVNISNLAQIYDLKTEEAKKL
ENAVETASQLYLTGRATYLEILLNRQNAIRANLELIEIKQQQFNATVTLYRALGGGWR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgattatagcacgctttattgtcatatcatttctttgtatctgggccagcagttgcaaa
gcaccctctattgttttcaacaccaatccattacagccactccctactcagtataccgat
caaatgcccaatgcaggcagtgcggagcaatcctggcgtactttttttaaggattctcta
ttgatatcattgatagataccgcgctggttcacaaccttgacctgctccgaatgcagcaa
cgcattgcggtttttgatgcccaggtactccaggcacaagggcgccttagaccttttgtg
gcaggaacagggagcgtaggtatgaggcgttttggcaaatataccatggatggtgtggga
aacttcgataccaatttctctaccaacatcagcagttcacagcgtgttccggaatatttg
cctgattttttttggggagttcagagttcctgggaaatagatatctacaaaaaacttcgc
aatcagcgtcaagcggctatttcgcgttatatggccaccctcgaaggtcgtaacttattg
attacccatttggtttcagacattgccaatacctattatgacctcatttcgtccgactta
gagttggattttatccgagctaccatcatgctgcaacgctcacaactggatctcattcgg
ttggagaaagaggccggacgcagcacagaactggccgttcagcagtttgaagcgcaactg
ctcaacgcccaagccctcgaaaaagaactgctccagcaaatcaattttgacgaaagccga
attaactttattctggggcgtttttcgaaacctgttgttcgtaataaaatctcttttact
caactcaccttaccttcaattgacaggggttcgcctgctgacctactcaaaaacaggccc
gatattcgccgggcagagtatgaagttatggccgccaaagccgatgtggctgctgccaga
gctgcttttttgccatcgctcaatctgggaggcagcctcggttttcaggcgttcaacccc
cgttttattttgagtccgcattccatcgccttcaatttgttgggtggaattaccgcgcct
ttggtcaataaaaccgcaattcaggcggagttcaatgtgcgaaaagcctcacaattggat
gcattgtataactatcagcaaaccattcttaacggctacctggaagtgcataatcagtgg
gtcaatatcagcaatttagcgcagatatatgacctgaaaaccgaagaggccaaaaaactt
gaaaatgccgttgaaacggcttcgcagttgtacctgacgggccgagcaacgtatttggaa
attttactcaatcgccaaaacgccatccgtgccaatctcgaactcatcgaaattaaacag
caacagtttaatgcaaccgtaacgctttaccgcgctctgggaggaggctggagataa
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