Ralstonia pseudosolanacearum GMI1000: RSc1294
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Entry
RSc1294 CDS
T00071
Name
(GenBank) putative outer membrane chanel lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso01501
beta-Lactam resistance
rso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSc1294
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RSc1294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rso02000
]
RSc1294
01504 Antimicrobial resistance genes [BR:
rso01504
]
RSc1294
Transporters [BR:
rso02000
]
Other transporters
Pores ion channels [TC:
1
]
RSc1294
Antimicrobial resistance genes [BR:
rso01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RSc1294
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RSc1294
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RSc1294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CAD14996
UniProt:
Q8XZV1
LinkDB
All DBs
Position
complement(1379195..1380664)
Genome browser
AA seq
489 aa
AA seq
DB search
MALSAIALAALAGCADFGNAHSTQTLTAPGQLASDRTLPSQGGQWPSQNWVDQFNDPQLR
ALVDEAIHDSPNLQVAFARVRASRAMADAARGDLYPSVGLDAEMTRQRFSSYDLFEGTPL
GGNWVTESKIQLGVSYDLDFWGKNRAALESALSDDKAMEAESQASRLMLSTSVARTYVKL
AALYAQRDVAERTIAQRRELVSLSGQRLRAGLDTQVETTQARANIAAAQTELEQVDEQIA
LARNQLAALLGKGPDRGLAIARPTLLAQPTPKLPDHLSIDLIGRRPDLVAARWRVEATAK
DIDVAKAQFLPDISLTAFLGLASIAPENLLLGNARQLGIGPALRLPIFEGGKLRANLRGK
YAGYDAAVASYNQTLTEALHDTADQITSLHSIDTQIDIQRTALAEAERAYSLARTRYGAG
LGTQLTVLNAESTVLQQRRLAALLQARRLDAQMALIKALGGGYTAEALPGAAPDTRTTGD
AAQIAPSHS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctgagcgccatcgccctggctgcgctggccggctgcgccgacttcggcaacgcg
cacagcacgcagacgctcaccgcgcccgggcaactggccagcgacaggacgctgccgtcg
cagggcggccagtggccgtcgcagaactgggtggaccagttcaacgacccgcaactgcga
gcgctcgtcgacgaggccatccacgacagcccgaacctgcaggtcgccttcgcccgcgtg
cgagcctcccgcgccatggccgacgcggcgcgcggcgacctgtatccgagcgtcgggctg
gatgcggagatgacgcgccagcgcttctcttcgtatgacctgttcgaaggcacgccgctg
ggcggcaactgggtcaccgagtcgaagatccagctcggcgtgagctacgacctcgacttc
tggggcaagaaccgcgccgcgctggaatccgcgctgtcggacgacaaggccatggaggcc
gagagccaggcctcccggctgatgctgtcgacctcggtggcacgcacctatgtcaagctg
gccgcgctctacgcccagcgcgacgtagccgagcggaccatcgcgcagcgccgcgagctg
gtgtcgctgtcgggccagcgcctgcgcgccgggctggatacgcaggtcgagaccacgcag
gcgcgcgccaacatcgccgccgcgcagaccgaactggagcaggtggacgagcagatcgcc
ctggcccgcaaccagctcgccgcgctgctgggcaaggggccggaccgcggccttgccatc
gcccggccgaccctgctggcacagcccacgcccaagctgccggaccacctgagcatcgac
ctgatcggccgccgcccggacctggtggccgcgcgctggcgcgtcgaggccaccgccaag
gacatcgacgtggccaaggcccagttcctgcccgacatcagcctgaccgcgttcctgggc
ctggcctccatcgcgcccgagaacctgctgctgggcaacgcgcgccagctgggcatcggc
ccggcgctgcgcctgccgatcttcgagggcggcaagctgcgcgccaacctgcgtggcaag
tacgccggctacgacgccgccgtggccagctacaaccagacgctgaccgaagccctgcac
gacaccgccgaccagatcacctcgctgcacagcatcgacacccagatcgacatccagcgg
accgcgctggccgaagccgagcgcgcctacagcctggcccgcacacgctacggcgccggc
ctcggcacccagctgacagtcctgaatgccgagagcaccgtgctgcagcagcgcaggctg
gccgccctgctgcaggcgcgccgcctggatgcccagatggccctgatcaaggcgctcggc
ggcggctacaccgccgaagccctgcccggcgccgcgcccgacacccgcacgaccggcgac
gccgcccagatcgcgccgtcgcacagctga
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