Roseivirga spongicola: T7867_12770
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Entry
T7867_12770 CDS
T09626
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
rsr
Roseivirga spongicola
Pathway
rsr01501
beta-Lactam resistance
rsr01503
Cationic antimicrobial peptide (CAMP) resistance
rsr02020
Two-component system
rsr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
T7867_12770
09132 Signal transduction
02020 Two-component system
T7867_12770
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T7867_12770
01503 Cationic antimicrobial peptide (CAMP) resistance
T7867_12770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsr02000
]
T7867_12770
02044 Secretion system [BR:
rsr02044
]
T7867_12770
01504 Antimicrobial resistance genes [BR:
rsr01504
]
T7867_12770
Transporters [BR:
rsr02000
]
Other transporters
Pores ion channels [TC:
1
]
T7867_12770
Secretion system [BR:
rsr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
T7867_12770
RTX toxin transporter
T7867_12770
Multiple protein transporter
T7867_12770
RaxAB-RaxC type I secretion system protein
T7867_12770
Antimicrobial resistance genes [BR:
rsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
T7867_12770
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
T7867_12770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WPZ09130
LinkDB
All DBs
Position
2868191..2869645
Genome browser
AA seq
484 aa
AA seq
DB search
MKFKNTIILGLGLLFSVNLARGQESQTTFTLEECIAYAWENNLNVRNNQLNQVSNEIALK
QSKMALLPSLSAGGSVGKSFGRSIDPVSNSFVSQDFTTGGFSANSSVTLFGGGTLRNTIK
QNELNLEASAFDLEKAKNDIGLQVATNFLNVLLNKEQLENAKYQKEITSAQLERTKKQVQ
AGALPLTNQLDLESQFASNEVQVVNAENALNLAILNLKQAMQMSADQQLNVAAPEIEVDD
IQLAMEDPSKIYEIALSNQPEVKSAELGIESGDVGVKISKGAFLPTLSLSASISTNYSDQ
AREFLRTEPVNVPSQEIGFVQGSNNPVFSNPSTRTVSVFSDDYKTFDQFNDNLGQSVRMN
LNVPIFSRYSNSANLQRAEINKQRAEIQAQTVKNTLRQNIETAYNSAIAALKSFEASEKR
VAALEESFRAIESRYNVGDANFVDYQVANNNLFAARTDLVRAKYEYIFRATILDFYLGNP
ITLD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaagaacacaattattttggggctaggattgctcttcagtgtcaacctggcg
cgaggtcaagaaagtcaaacaacattcacgctagaagaatgtattgcctatgcctgggag
aataacctaaacgttagaaataaccagctaaaccaagtaagcaatgaaattgctcttaag
cagtctaaaatggccttattgccaagtttaagtgctggaggaagtgtaggtaagtctttt
ggtagaagtattgacccggtgtctaactctttcgtaagtcaagactttactacaggtggt
ttttctgctaattcttcagtaaccctttttggaggaggaactcttagaaataccattaag
cagaacgagttgaatctagaggcaagtgcctttgatctagaaaaggccaaaaacgatatt
ggacttcaggtagctaccaattttttgaatgttcttttgaataaagagcaacttgaaaac
gcgaagtatcaaaaagagattacttctgctcagttagaaagaacaaagaaacaggttcag
gccggggctctccctttaaccaatcagttggacttagagtcgcaattcgcctctaatgaa
gtacaagttgttaatgctgaaaatgccctgaaccttgccattcttaatttgaagcaagca
atgcaaatgtcggcagaccaacagttaaatgttgcagcaccagaaattgaggtagacgac
attcaattggctatggaagatccttcaaagatttatgaaatagcattatcaaatcaacca
gaggttaaaagcgcagagctgggtatcgaaagtggtgatgttggagtaaagatttctaaa
ggtgcttttcttccaactttatcattaagcgcaagtatttcaaccaactattcagaccaa
gcaagggagtttttgagaaccgagccagttaatgttccatctcaagagataggttttgtg
caaggctctaataatcctgtgttttctaacccttcgactagaactgtgtctgtgttctca
gatgattacaagactttcgatcagtttaacgataacctagggcagtcagttagaatgaac
ctaaacgttccaatattcagcagatatagcaactcggccaatttacaaagagctgagatc
aacaagcagagagctgaaattcaagcacaaacggttaagaataccctaagacaaaatatc
gaaacggcttacaatagtgctattgcagcccttaagtctttcgaagcatcagagaaaaga
gtggctgctttagaggagtcatttagagctattgaaagcagatacaacgtaggtgatgca
aactttgtagattaccaagtggcaaacaataacttatttgcggcaagaactgatttggtt
cgcgctaaatacgagtacattttccgtgcaacaattttagatttttatttaggtaaccct
atcactttagattaa
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