Rana temporaria (common frog): 120929038
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Entry
120929038 CDS
T07929
Name
(RefSeq) matrix metalloproteinase-18-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120929038
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120929038
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
120929038
Peptidases and inhibitors [BR:
rtem01002
]
Metallo peptidases
Family M10
120929038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
120929038
NCBI-ProteinID:
XP_040196156
LinkDB
All DBs
Position
2:complement(56818988..56835950)
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AA seq
466 aa
AA seq
DB search
MTSLLLLLLSCAALAAAFPAAPQDDQESRYAQLAEKYLTKFYDLKPTGGKVGRKNIKNPF
TEKLEEMQKFFGLNVTGKLDHKTVEMMEKPRCGVHDIGQYSTVTKSSAWQKTDLTYRILN
FTPDMPQADVENSLARALKVWSDVTPLTFTRVYDGECDIEIKFVVGDHKDNSPFDGPNGV
LAHAFQPGNGIGGDAHFDDDEQFTKNSQEYNLFLVAAHEFGHSLGLHHSEDPGALMYPNY
PNTDPNRFKLPQDDINAIQYLYGKTSDEVQPTGPTTPSKCDQNLVFDAVTTLRGELFFFI
NRFIWRKHPRGGEADLLFIQNLWPTLPNDIDAAYDNPITGEVLVFKGDKYWTLDGFDVSQ
GARSITKFGFPKNVKKIDAAVHVEHLGKTYFFVKNKYWSYDEDKKAMDAGFPKFIAKGFP
GMSPNIDAVVYYRDLLYFFQGTSQFQYSIESKRILQVLATNSWLGC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtctactcctcctcctcctgtcttgtgcagccctggctgctgccttcccagct
gctccacaagatgaccaagaaagcagatacgcacaattggcagagaaatatctaacaaag
ttttatgacctgaaacctactgggggcaaagtagggagaaaaaatatcaaaaaccccttc
actgaaaagcttgaagaaatgcagaagtttttcggtctgaatgtaactggaaaactggat
cataagactgtagaaatgatggagaagcctcgctgtggagtccatgacatcggccagtac
agtacggtcacaaaaagctctgcctggcaaaagacagacctgacctacaggattttgaat
ttcacaccagacatgcctcaggcagatgtggagaattccctggcaagagctttaaaagtg
tggagtgatgtcaccccactgacctttaccagagtctatgatggcgaatgcgatattgag
atcaagtttgtagttggagatcataaggataactctccattcgatggacctaatggggtg
ttagctcacgcatttcagcctggtaacggcattgggggggatgctcactttgatgatgat
gaacaattcacaaaaaacagccaagaatacaatctgtttttggtggcggctcatgaattt
ggacattcacttggtcttcaccattctgaagaccccggtgcattaatgtaccctaattac
ccaaacacagaccccaaccggttcaagcttcctcaggatgacatcaatgctatccaatat
ctctatggcaagacctccgatgaagttcagccaacaggacccaccaccccctccaaatgt
gaccaaaaccttgtgtttgatgctgtcaccaccctccgaggagaattatttttctttata
aacaggtttatatggcgtaaacatccacgagggggtgaggctgatctgctttttatccag
aacctgtggccaactttacccaatgacattgatgcagcttatgacaatcctattactgga
gaagttcttgtatttaaaggggacaaatattggactcttgatggatttgatgtttcacaa
ggcgctagaagcatcaccaagtttggattccctaaaaacgttaagaaaatcgatgcggct
gtccatgtggaacacctggggaagacttacttctttgtgaaaaataagtactggagttat
gatgaagacaaaaaagcaatggatgcaggatttccaaagttcattgctaaaggatttcca
ggaatgagtccaaatatcgatgctgtggtttattacagagaccttctttacttcttccaa
ggaacatcacagttccagtacagcattgagtcaaaaagaatcctccaggtcctggccacc
aacagctggctgggatgttaa
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