Rhodanobacter thiooxydans: LRK53_00735
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Entry
LRK53_00735 CDS
T08065
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth01501
beta-Lactam resistance
rth02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRK53_00735
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LRK53_00735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rth02000
]
LRK53_00735
01504 Antimicrobial resistance genes [BR:
rth01504
]
LRK53_00735
Transporters [BR:
rth02000
]
Other transporters
Pores ion channels [TC:
1
]
LRK53_00735
Antimicrobial resistance genes [BR:
rth01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LRK53_00735
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LRK53_00735
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LRK53_00735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CSLinker
Motif
Other DBs
NCBI-ProteinID:
UJJ54966
LinkDB
All DBs
Position
complement(173154..174605)
Genome browser
AA seq
483 aa
AA seq
DB search
MHLHQLAAAAALTLALAACASSGGLHPEGTPTDPSTLKAGRSLAQLSAAAWPTTDWWTGL
GDRQLDALIAEALQDNPGLGVADARARAAQAAAGFADAARGPSVNGGAAVAGARPPPALL
GDKAHFAIAKYGYTSFKWDLDPWGGKRAAWEAALGQARAAEVDARAARIELSGNVARAYV
QLGYAFTQQDLADAELQRAGSARELTRQRVAAGIDNQVALKQGDAEVASAEQQAALARRA
VDAARSSLAVLLGKGPDRGLQLERPRQLAPAALAVPAKLPLELVGHRADLVAARWRVEAA
GKDIRAAKTEFLPDISIGAMAGLVSLGGANPLSLAGRFYQVGPSLSLPIFDGGRLRANLS
AKDAQYDLAVAQYNQTLVGALNQVADELSALKSLQTQIAAQQRAQDAAQQAWDLAEQRYQ
AGVGSYLEALSVRQQLLAVERGSAALEAQQADLSVQLIQALGGGYQPRTDAAVAIPSPTP
SRS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaactggcggctgcggctgccctgacccttgcgctggccgcttgtgcc
agcagcggcggcttgcacccggaaggcacgccgaccgacccgtccaccctgaaggccggg
cgcagcctggcccagctgtccgcggccgcgtggccaaccaccgactggtggaccgggctg
ggcgaccggcaattggacgcgttgatcgccgaggcgctgcaggacaaccctggcctgggt
gtggccgatgcgcgcgcccgcgccgcgcaggccgcggcgggcttcgccgacgccgcacgc
gggcccagcgtgaacggcggcgccgcggtcgccggtgcccggccgccgcccgcactgctc
ggcgacaaggcgcatttcgccatcgccaagtacggctacaccagcttcaagtgggatctg
gacccatggggcggcaagcgcgccgcgtgggaagcggcgctgggccaggcgcgcgcagcc
gaggtggacgcccgtgccgcgcgcatcgagctgtccggcaacgtggcccgcgcctatgtc
cagctcggctatgccttcacccagcaggacctggccgacgccgagctgcaacgcgccggt
tccgcgcgcgaactgacccgccagcgcgtggccgccggcatcgacaaccaggtcgcgctg
aagcagggcgacgccgaagtggccagcgccgagcagcaggcggcactggcccgtcgcgcg
gtcgatgcggcgcgctcgtcgctggcggtgctgctgggcaagggcccggaccgcggcctg
cagctcgaacggccgcggcagctggcgccggccgcgctggcggtgccggcgaagctgccg
ctggagctcgtcggccatcgcgccgacctggtcgcggcgcgctggcgcgtcgaggccgcg
ggcaaggacatcagggcggcgaagaccgagttcctgccggacatcagcatcggcgcgatg
gccggcctggtcagcttgggcggcgccaatccgctcagcctggccggacggttctaccag
gtcgggccgtcgctcagcctgccgatcttcgacggcggccgcctgcgcgcgaacctttcg
gccaaggacgcgcagtacgacctcgccgtggcgcagtacaaccagaccctggtcggcgcg
ctcaaccaggttgccgacgaactctccgcgctcaagtcgctgcagacgcagatcgccgcg
cagcaacgcgcgcaggatgccgcgcaacaagcctgggatctggccgagcagcgctaccag
gccggcgtcggcagctacctggaagcgctcagcgtgcgccagcagttgctcgccgtcgag
cgcggcagcgccgcgcttgaagcgcagcaggccgatctttcggtacagctgatccaggcc
ctcggcggcggctaccagccgcgcaccgatgcggccgtcgccatcccgtcccccaccccg
tcacgttcctga
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