Rufibacter tibetensis: DC20_18380
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Entry
DC20_18380 CDS
T04099
Name
(GenBank) hypothetical protein
KO
K12340
outer membrane protein
Organism
rti
Rufibacter tibetensis
Pathway
rti01501
beta-Lactam resistance
rti01503
Cationic antimicrobial peptide (CAMP) resistance
rti02020
Two-component system
rti03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DC20_18380
09132 Signal transduction
02020 Two-component system
DC20_18380
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DC20_18380
01503 Cationic antimicrobial peptide (CAMP) resistance
DC20_18380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rti02000
]
DC20_18380
02044 Secretion system [BR:
rti02044
]
DC20_18380
01504 Antimicrobial resistance genes [BR:
rti01504
]
DC20_18380
Transporters [BR:
rti02000
]
Other transporters
Pores ion channels [TC:
1
]
DC20_18380
Secretion system [BR:
rti02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DC20_18380
RTX toxin transporter
DC20_18380
Multiple protein transporter
DC20_18380
RaxAB-RaxC type I secretion system protein
DC20_18380
Antimicrobial resistance genes [BR:
rti01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
DC20_18380
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
DC20_18380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ALJ00578
UniProt:
A0A0P0CAB3
LinkDB
All DBs
Position
4486222..4487688
Genome browser
AA seq
488 aa
AA seq
DB search
MRRFSSKFLSTLGLVIGCHTFTLAQTGTSAEAVWSLEQCVEHAAKNNLQIRQSGLSIEQA
TIDVNQARADQLPQINGSGSHGFNNGFFLDPVRNQIQNTQIWSGNVGVNGSVNLYSGLQT
HNTIKRNRLEVQASQLDQQKVQNDVTLNVVTAYMNILLNQEILKTNQERLNLTQSQLERT
QKLFKAGSVPESNVLDLSAQMASDELNIITAQNNIELAELQLIQLLNLTNSNPANFSIVI
PNIPDPDQMVIAFNAEDVYATASDRMPEILRARLRIQSADKSIAIAKGGYQPRLSLVGSI
NTRYSSGSSLISLGNTISQRTLVGYQDENMNQPIYIYTPSVEQTPREYPYFNQLQDNIGQ
YIGLNLSVPILNGFRVRNNVQLSRISLKNAEINSDIAKNELKQTIAQAYTDAIGAQKRFV
AARKQLVAFEQAYKNAEIRLNNGLINNVDFNVARNNLVKAQSDIIQAKYDYTFRLKFLEF
YQGKTITL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgtttctcctcaaaatttctttccacgctggggctggtcataggctgtcacacc
ttcactctggcacaaacgggtacttcagcagaggctgtctggagcttagaacagtgtgtg
gaacatgctgcaaaaaacaacttgcagattaggcagtccgggctgtccatagaacaggct
accattgatgtcaatcaggcacgggcagatcaattaccccaaataaacgggagtggttcc
catggatttaataacggtttctttctggacccagttagaaaccaaatccagaacacgcag
atttggtcgggcaacgtaggggtgaatggctctgtgaacctgtatagtggtttgcagacg
cacaacaccatcaagcgaaacagacttgaggtgcaggccagtcagcttgaccagcagaaa
gttcagaatgatgttaccttgaacgtggtaaccgcttatatgaacatcctgctgaaccag
gagatccttaaaaccaatcaggagcggcttaaccttacccaaagccaattagagcgtact
caaaagctgtttaaagcagggagcgttcctgaaagtaatgttttagacttaagcgcccaa
atggctagtgatgaactaaatatcatcactgcacaaaataatattgagctggcagagttg
cagttgattcaattgttgaacctcacaaattcaaatccagccaatttctccattgtgata
ccaaacataccagatccagaccagatggtgattgcgtttaatgcagaagatgtgtatgct
accgcttctgacagaatgccagagatcttaagggccaggctgcgaattcaaagtgctgac
aaatccatagctattgcaaaaggagggtaccaaccccgcctgagtttggtaggtagcatc
aatacacgttactccagcggttcttccctgatctctctaggcaataccatttcccaaaga
acattggttggttaccaggacgagaacatgaatcaacccatctatatctatactccatct
gttgagcaaacacctcgggagtacccatacttcaaccagttacaggataatattggtcag
tatatagggctgaatttaagtgttcccatactaaatggtttcagggtgaggaacaacgta
cagttatctagaattagcttgaaaaacgcagaaatcaattctgatatagccaaaaacgag
ttgaaacaaaccattgcgcaagcctacacagatgcaattggagcacagaaaaggtttgtt
gcagcaagaaaacagctggtagcttttgaacaagcctataaaaatgcggagattcgcctg
aacaatggcttaatcaacaatgtggattttaatgtggcccgcaacaatttagtaaaagcc
cagtcagacattatacaggccaaatacgattacactttcagacttaagttcctggagttc
taccagggcaaaaccattactctctaa
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