Rhincodon typus (whale shark): 109910714
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Entry
109910714 CDS
T06055
Name
(RefSeq) trifunctional enzyme subunit alpha, mitochondrial isoform X1
KO
K07515
enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.211
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00062
Fatty acid elongation
rtp00071
Fatty acid degradation
rtp00280
Valine, leucine and isoleucine degradation
rtp00310
Lysine degradation
rtp00380
Tryptophan metabolism
rtp00410
beta-Alanine metabolism
rtp00640
Propanoate metabolism
rtp00650
Butanoate metabolism
rtp01100
Metabolic pathways
rtp01212
Fatty acid metabolism
Module
rtp_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
rtp_M00085
Fatty acid elongation in mitochondria
rtp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
109910714
00650 Butanoate metabolism
109910714
09103 Lipid metabolism
00062 Fatty acid elongation
109910714
00071 Fatty acid degradation
109910714
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
109910714
00310 Lysine degradation
109910714
00380 Tryptophan metabolism
109910714
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
109910714
Enzymes [BR:
rtp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
109910714
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
109910714
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-GeneID:
109910714
NCBI-ProteinID:
XP_020365543
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All DBs
Position
5:complement(120058270..120160165)
Genome browser
AA seq
763 aa
AA seq
DB search
MAAVRASGIMKRFSMFRQFCYSGYACRHFAVSSIMMERTHVNCEIKGDVAVVRFNTPDSK
VNTLSKKLQSEFTEVMNEVWANDGVRSAVLISSKPSCFIAGADINMIEECKSVEEVTRLS
QEGQKMFLKIEESTKPVVAAINGSCLGGGLEVAIACHYRIATKDSKTVLGTPEVMLGLLP
GAGGTQRLPKMVGLPNAFDMMLTGKNIRADKAKKMGLVDQLVSPLGPGLKNPEERTMEYL
EEVAIVCARGLVNKQISIQKKKTLVDTVQSWAFKFPVIREQVYKMVRKKVMAQTKGLYPA
PLKIIEVVKTGLEQGSDAGYLVESQKFGELAMTNESKALTGLYHGQVACKKNKFGKPQKE
TETVAILGAGLMGAGIAQVTIDKGILTVLKDTTMEGLDRGQQQIYKGLNDKVKRKNLTSF
QRDRLLSNLIGQLDYKGFEKADIVIEAVFEDMKIKHTVLKEVEAVVAPHCIFASNTSALP
ISEIAAVSKRPEKVIGMHYFSPVDRMQLLEIITTDKTSKDTTAAAVALGLKQGKVIIVVK
DGPGFYTTRCLAPTLAEALRVLQEHADPKKLDAVTTGYGFPVGTATLIDEVGIDVAAHVA
EDLGKAFGSRMAGGSAELLKEMVAKGFLGRKTGKGCYLYQAGVKGKTLNPGAKEILERFK
LPANLEVSSDEDIQLRLVSRFVNEAVLCLQDGILNDPIEGDIGAVFGLGFPPCLGGPFKF
LDAYGANKLVDKMKKYESVYGNEFSPCQMLLDYAKDTSKKFRH
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgcgggcgtccggcatcatgaagcggttctcgatgtttaggcagttttgt
tattcaggctatgcctgtcgccatttcgcagtttcttcaattatgatggagcggactcat
gtcaactgtgaaattaaaggtgatgttgcagttgtgcgatttaatactccagattctaag
gttaacaccctatctaaaaagctacaatcagagtttactgaggtgatgaatgaagtttgg
gcaaatgatggtgttcgaagtgctgttcttatttcatcaaaaccaagctgtttcattgct
ggtgctgacatcaatatgatagaggaatgtaaatctgtggaagaagtgacacgtttatct
caggaggggcagaaaatgtttctgaagattgaagaatcgaccaaacctgttgtagctgct
atcaatggttcctgccttggaggtggtcttgaggttgccatcgcctgccattacaggata
gcaacaaaggacagcaagacagtattgggcactccggaagttatgcttggcttactgcca
ggagctggtggtactcagaggctaccaaagatggttggtcttccgaatgcctttgatatg
atgttgactgggaaaaatatccgggcagataaagctaagaagatgggtttggttgaccaa
ctagtttcaccccttggccctggcctgaaaaatccagaggagagaacaatggaatacctg
gaagaagtagcaattgtttgtgctagaggactagtaaataagcagatctccattcaaaag
aagaaaacacttgttgacactgtgcagtcgtgggcatttaagtttcctgtaatcagggag
caagtttataaaatggtaagaaaaaaggtgatggcgcagaccaaaggactttatcctgcc
ccactgaagatcattgaggttgtgaaaactggattagagcagggatcggatgccggttat
ctagttgaatcgcagaaatttggagaactggcgatgacaaatgaatcaaaagcactaact
ggactttatcacggtcaagtagcctgcaagaagaacaaatttggaaaaccacagaaagaa
actgagacagttgccattttgggtgctggtctaatgggtgctggtatagcacaggtcaca
atagacaaaggtattttaactgtcttaaaagataccacaatggaaggccttgatcgaggt
caacaacaaatctataaaggattgaatgataaagtaaagagaaagaatttaacatcattt
cagcgggatagactgttgtcaaatttgattggtcagttagactacaaaggatttgagaaa
gccgacatagtcattgaagcagtttttgaagatatgaaaatcaagcatactgtactgaag
gaagttgaagctgttgtagctcctcattgtatatttgctagtaacacatcagctcttcca
atttctgaaattgctgctgtcagtaagagaccagagaaggtaattggaatgcactatttc
tcacctgtagacaggatgcagttactggaaattatcaccacagataaaacctccaaagat
acaactgcagctgctgttgcacttggtcttaagcagggaaaagtcataattgtagtaaag
gatggccctggcttttataccacaagatgccttgcacctacattggcagaagcactcaga
gtcttgcaggaacatgctgacccaaagaaactggatgcagttacaactggctatggattt
cctgtgggcactgccacattgattgatgaagttggtattgacgtcgcagcacatgttgca
gaggatttaggaaaagcttttggctctcgaatggcaggtggaagcgctgaacttttaaag
gagatggtggcaaagggatttttaggccgtaagacgggaaaaggttgctacctttatcag
gcaggtgtgaaaggcaaaactttgaatccaggcgcaaaggaaattttagaacgttttaag
ctgcctgctaaccttgaggtttcatcagatgaagatattcagttgcgactggtgtcaaga
tttgtgaatgaggcagtactctgcctacaagatggaatattaaatgaccccattgaggga
gacattggtgctgtttttggacttgggttcccaccttgccttggaggaccattcaaattt
ttggatgcctatggagcaaacaaactggttgacaaaatgaaaaaatatgaaagcgtttac
ggcaatgaattctcaccttgccagatgttactggattatgcaaaggacacaagcaaaaaa
ttccgtcactaa
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