Rhincodon typus (whale shark): 109918716
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Entry
109918716 CDS
T06055
Symbol
f2
Name
(RefSeq) prothrombin
KO
K01313
coagulation factor II (thrombin) [EC:
3.4.21.5
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109918716 (f2)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109918716 (f2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109918716 (f2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109918716 (f2)
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109918716 (f2)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.5 thrombin
109918716 (f2)
Peptidases and inhibitors [BR:
rtp01002
]
Serine peptidases
Family S1: chymotrypsin family
109918716 (f2)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
109918716 (f2)
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
109918716 (f2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
Gla
Thrombin_light
DUF1986
Motif
Other DBs
NCBI-GeneID:
109918716
NCBI-ProteinID:
XP_020374241
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All DBs
Position
17:complement(12263989..12325195)
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AA seq
617 aa
AA seq
DB search
MGLIRDSLVVQFLILSVVKLCWTGNVFLNNQEASSVLNRIRRANRFLEEAKSGDLERECI
EEYCDHEEAREVFEDDQATEKFWVTYEVCVADNEGSSPPDHLKKCLDGECYQGIGSHYKG
NAAMTVSGRQCQSWSSNYPHKPKYNPDTHNQSDLINNYCRNPSDSNMGPWCYTKDPTVQM
EACYVPRCGEELPPLPTKPPVSVPLSSCVPNQGVDYRGTQNVTRRGKQCQFWNSQYPHKH
NFTREEMILANLEGNYCRNPDGDEDGAWCFTTDPAVEIDYCNLDYCDDLIDIFEEPPEEE
IEEESERTGRTTGSGYTTSFNPKFFGEGESECGLRALFERRNKEDEGEKEMLESLKGRIV
HGKNAEIGSAPWQVMLFRKSPQQMLCGGSLVSDQWIITAAHCILYPPWDKNFTEKDILVR
LGKHKRAGYEKETEKIFALDKIIVHPRYDWKTNLNRDIALLHLKKPTVFTDYISPICLPT
MEVTRRLLYKQHLGRITGWGNLQESFVNTASNRPKELQYVQLPINTQQTCNLSTNIPLTK
NMFCAGHSVESGLRGDACEGDSGGPFVMKNPGNNRWYLMGIVSWGEGCDRDGKYGFYTHV
FRFRRWLMKAIKTKIPS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggggctaatcagagactctctcgttgtacagtttttaatcctttctgttgtcaagctt
tgttggactggcaatgtgttcctcaacaaccaggaagcatcctctgtgttgaatcgaatt
cggcgagccaacaggttcttagaagaagcaaaatctggagatttagagcgagaatgtatc
gaggaatactgtgatcatgaagaggcccgtgaagtgtttgaggatgaccaggcaacagag
aaattttgggtcacttatgaggtatgtgttgctgataacgaaggcagttcccctccagat
cacctgaagaaatgtctagatggagaatgctatcaagggattggctcccattacaagggc
aatgctgcaatgactgtgtctgggaggcagtgtcagagctggtcaagtaactacccacac
aaaccgaaatacaatccagatacacacaaccagtctgaccttataaataactactgccga
aatccaagtgacagtaacatggggccgtggtgctacactaaggacccaacagtccaaatg
gaagcatgttacgttccacgctgtggtgaagaattgccaccattaccaacaaaaccacca
gtgtcagtaccacttagctcttgtgttccaaatcagggagtggactacagaggaacacag
aatgtaactagacgtggaaaacagtgccagttctggaactcacagtacccccacaagcac
aattttaccagagaggaaatgatattagcaaatctagaaggaaattactgcagaaatcca
gatggggatgaagatggtgcatggtgtttcaccactgacccagcagtggaaatcgattac
tgcaaccttgattactgtgatgaccttatagatatatttgaagaaccaccagaggaagaa
atagaggaggaaagtgagagaactggtcgaacaacaggttctgggtacacaacttccttc
aatcctaaattttttggtgaaggagagagtgaatgtggtctgagagcattatttgaacgc
aggaacaaggaagatgaaggagaaaaggaaatgctggagtcccttaaaggtcgaattgtg
cacggaaagaatgctgaaatagggagtgccccatggcaagtgatgctgttccgtaaaagt
ccgcagcagatgctgtgtggcggcagcctagtgagtgaccagtggattattacagcagcc
cactgtatcttgtatcctccatgggacaaaaacttcacagagaaagatattcttgtccgt
cttgggaagcacaaacgagctgggtatgaaaaagaaacagaaaaaatctttgcacttgat
aaaattattgttcatcccagatatgactggaaaacaaaccttaaccgtgatattgcattg
ttgcatttgaaaaaacccaccgtattcactgactatatatcacccatctgtctgccaacc
atggaagtcacccgcaggttactatacaagcagcacttgggtcggatcacaggttgggga
aacctgcaggaaagctttgtcaatacagcatccaatagacctaaggaactgcagtatgtc
cagcttcccatcaacacacagcagacctgtaatttatccacaaatattcctcttactaaa
aacatgttctgtgctggtcacagtgtggaatctggcctgcgtggagatgcctgtgaggga
gacagcgggggcccctttgtgatgaagaatccgggcaataatcgatggtacctgatgggc
atcgtctcctggggagaaggatgtgaccgggatgggaaatatggattctacactcatgta
tttaggtttagaaggtggttgatgaaagctataaagaccaagataccttcatag
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