Salicibibacter kimchii: DT065_02275
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Entry
DT065_02275 CDS
T05571
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rue
Salicibibacter kimchii
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rue03400
]
DT065_02275 (addB)
Enzymes [BR:
rue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DT065_02275 (addB)
DNA repair and recombination proteins [BR:
rue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DT065_02275 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AXF54956
UniProt:
A0A345BVH5
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All DBs
Position
400099..403539
Genome browser
AA seq
1146 aa
AA seq
DB search
MQLRFYVGESGSGKTTTLLNEVEHALSEEAVDGPPILILVPEQMTFQIEYQLTKQLGGMA
RAHVLSFSRLALRILQETGGNTGDRLQRAGVHMLLRKIVEDEKKHFRVFRKAADTDGFIH
ELEQMMTEMRRQALTTEVITEKQSQLEEDGEPAGLRDKLHDISLVYGRFEQAFQGTYMNT
EEALKRLIQQLPDSEWLKDAIVYVDGFYDFSPQELYVIESLFSKVKEMTVSLTIDHVPNQ
EMSPNELNRFYLTAKTYTKLTTLAKTNNIGWNVRTFSGRPPSAHEEGQALQLFEAVNRRA
EIEGVARKIIELVRDHGYQYGDIALLVRDDRPYDELLKRVFGRFEIPIFLDEKRSMMHHP
VVELIRSTLEIVEKNWSFEAVFRALKTDLFFAVTDDWTDWREKVDELENYALAHGIYGNK
WKEKRHWHYRRHRNVMDSDGQTDMEKKIEARINHTRDTLIAPLLTLEARVKQSESVRRRC
EALYLFFEELQLPAKIERMRDQAIAAGSLENAAEHDQVWENVMDMLDQFVNAAGDDDLSL
FYFTRMMDAGLESMQFAIVPPAIDQVTIADMERSRLPDVRVTFILGANEGILPAKPEEDG
LIRDRERDQLEDIGLSVGPSANDLLWNEPFYLYMAEASSTDLLIYTYALADEDGKTLLPS
PLIGRLWEQYPNMPHTFIESDAGSAQENMQSTFINHPDQAIEELAMQLQKWRNGEEISDV
WWHVYNWFTTKSKWQDRLRTALGSLFYKNEATRLEAATTRELYGEDIQTSVSRMEMFQKC
AFRHFGTYGLGLKEREVFKLEAPDIGELFHAALKDVAEVVRENNLVWADLSDQECAQIAR
ETVEKLLPHVQRNIMFSTNRHAYLSKKLEDVVVHTTKTLRTQAQSSSFVPIGLEVQFGNQ
KGNIPTYTFRLKNGSNLSLRGRIDRVDHAKSESGDLLRVIDYKSSRQQWRLSDVFHGISL
QMPVYLDIVLHSAKQWLGTDADIGGMFYFHVHNPVVEADESMDDTKIADHLLKQFKMQGV
LPADKNIAALMDQKLHEGGHSSIIPAYVKKDGAFSPSKSSVVSKEDFQSLRRYLHTKMKE
IGERLTDGNVGIEPYRTDKNEIACTYCPLQSVCQFDPTLPTNDYRLLPTLSVEKTMEGMK
REEDES
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgcgtttttatgttggggaaagcggaagtggaaaaacgaccacccttttaaat
gaagtagaacacgcattgtccgaggaagccgtcgatggcccgcccattcttattctcgtt
ccggaacaaatgacatttcaaatcgaataccaattgactaaacagctcggcgggatggcc
cgtgcccatgtgttgagcttctcacgcctggcgctccgcatcttgcaggaaacgggggga
aacaccggagaccgattgcaacgggccggtgtccatatgcttctgcgcaaaatcgtagaa
gatgagaaaaagcatttccgggtgtttagaaaagctgccgatacggacggttttattcat
gagttggagcagatgatgacggaaatgcgtaggcaagcgctgacaacggaggtgatcacc
gaaaaacaatcacaattagaagaggatggggaacccgctgggttgcgcgataaactccat
gatatttccctcgtttatgggcggtttgaacaagcttttcagggtacgtacatgaatacg
gaagaagcgctaaaacggcttatccaacaattaccggattcggagtggctaaaggacgcg
attgtttatgtcgatggtttttatgatttcagcccgcaggaactgtatgtcatcgaatcc
ctgttttccaaagtgaaggagatgaccgtttcccttaccattgatcatgttccaaaccaa
gagatgagccccaatgaacttaaccgtttctacctgacggcgaaaacgtacacaaaactg
acgacgcttgccaaaacgaacaacatcggctggaacgtgcgcacgttttcaggccgcccc
ccgagtgctcatgaagaaggccaagccctccagttgtttgaggcggtgaatcggcgggcg
gaaattgaaggagttgcccggaaaatcattgaactcgttcgcgaccatgggtatcaatac
ggggacattgctctccttgttcgcgacgaccgcccgtacgatgaattgctaaaacgcgtg
tttggacgctttgaaatccctatatttttggatgaaaaaagatcgatgatgcaccacccg
gtcgttgaactgattcgctccacactggaaatcgtggaaaaaaattggtcatttgaagcg
gtttttcgcgctttgaaaaccgatttgttttttgcggtcaccgacgattggacggattgg
cgcgaaaaagtggatgagctggaaaactacgcgttggctcacggcatttatggaaataaa
tggaaagaaaagcgccattggcactaccgacgacaccgtaatgtcatggatagcgacgga
cagaccgacatggaaaaaaagattgaagctcgcattaaccacacgagagatacgttgatc
gcaccgttacttacgttggaagcgcgtgtaaaacaaagcgaaagtgtacggagacgttgt
gaagcattgtatctttttttcgaagaattacagttgccggccaaaattgaacgaatgcgg
gaccaagcaatcgccgccggctcgttggaaaatgctgccgagcatgatcaagtatgggaa
aatgtaatggatatgctcgatcaatttgtgaatgctgccggcgatgatgatctctccctc
ttttattttacccgtatgatggatgccggcttggaaagcatgcaatttgccattgttcct
cctgccattgatcaagtgaccatcgcggatatggaacgctctcgtctgccggatgtgcgt
gtcacctttattctcggtgcaaatgaaggtattctgccagccaaaccggaagaagatggg
ctgatccgtgaccgtgaacgtgatcaactggaagatatcggcctgtccgtcggaccttct
gccaatgaccttctttggaacgaacctttttatctttatatggccgaggcaagttcgact
gatttgctgatttacacctacgcgctggccgatgaagatggcaaaacattgcttccctcc
ccccttatcggacgtttgtgggagcagtatccaaacatgccgcacacatttatcgaatcc
gatgccggaagtgcgcaggaaaacatgcaatcgacgtttatcaaccatccggaccaagcg
attgaagaattggcgatgcaattgcagaaatggcgaaacggcgaagagatttcggacgtt
tggtggcacgtctacaattggtttacgacaaaatcaaaatggcaggaccgcttgcgaacc
gcgttgggaagtttattttacaaaaatgaagccacgaggttggaggcagcaacgacgagg
gagctttatggagaagatattcaaacgagcgtcagccgcatggaaatgtttcaaaaatgt
gcgtttcggcattttggcacgtatggattagggttgaaagaacgagaggttttcaaatta
gaagctccggatatcggagaactttttcacgctgccctcaaagatgtagccgaagtggta
cgggaaaataatcttgtttgggcggatctttccgatcaggagtgcgcacaaattgctcgg
gaaacagtagagaaactgctgccccacgttcaacgaaatattatgttcagtacgaatcgt
catgcttacttaagcaaaaagttggaagacgtcgttgtccatacgacgaagacgttacgt
acccaggcgcaatcatcaagctttgttcctattgggctggaagtccaattcgggaatcaa
aaagggaatatccccacttatacatttcggttaaaaaacggaagcaacctgtctttgcgc
gggcgtattgaccgcgtggatcatgctaagagtgaaagcggcgacctgttgcgtgtgatt
gattataaatcgagtcggcaacaatggcgcttatcagatgtttttcacggcatttcctta
caaatgccggtctatttggatattgtcttgcatagcgccaaacaatggttaggcacagat
gcagatatcggaggaatgttttattttcatgtccacaatccggtcgttgaagcggatgaa
agcatggatgatacaaaaattgccgaccacctattgaaacagtttaagatgcagggggtt
ttgcccgcggataaaaatatagctgccctgatggatcaaaagcttcatgaaggaggacat
tcgtccattattcctgcttacgtgaaaaaagacggcgcgttttccccatccaaatcttcc
gtcgtttcgaaagaggatttccaatcactgaggcggtatttgcacactaagatgaaagaa
atcggggaaaggctgaccgacgggaatgttgggatcgaaccttatcgcaccgataaaaac
gaaattgcctgtacgtactgcccgctccaatcggtttgtcaattcgatccaacccttccg
accaatgactaccgattgttgcccacgctttcggttgaaaaaacgatggaaggtatgaag
cgagaggaggatgaatcatga
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