Salicibibacter kimchii: DT065_03050
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Entry
DT065_03050 CDS
T05571
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rue
Salicibibacter kimchii
Pathway
rue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DT065_03050 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rue03019
]
DT065_03050 (pnp)
03016 Transfer RNA biogenesis [BR:
rue03016
]
DT065_03050 (pnp)
Enzymes [BR:
rue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DT065_03050 (pnp)
Messenger RNA biogenesis [BR:
rue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DT065_03050 (pnp)
Transfer RNA biogenesis [BR:
rue03016
]
Prokaryotic type
tRNA degradation factors
DT065_03050 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
S1_2
Motif
Other DBs
NCBI-ProteinID:
AXF55093
UniProt:
A0A345BVW2
LinkDB
All DBs
Position
complement(573970..576048)
Genome browser
AA seq
692 aa
AA seq
DB search
MEGEQQVFSLDIGGRTMTFEVGKLAKQANGAVLVKYGDSVVLTTATGSKEPKDLPFFPLT
VNYEERLYAAGKIPGGFIKREGRPSEAATLTSRLIDRPIRPLFPDGFRNDVQVISTVMSV
DQDASPELAAMVGSSLALSISDIPFAGPIAGVEIGLVDGEFVVNPTSDQAENSEMELTVA
GTKDAINMVEAGANEVSEEKMLEAILFAHEEIKRIVTFQEEIVAQCGKEKMEVTLKQPDE
GLEADVRHQAEGQLKEAVLVKEKHARDVAIQEVEASIVANFDEEYHEDVKEILQSFLKKE
FRRLITKENIRPDGRTPEDIRDLSSEVQLLPRTHGSGLFTRGQTQALSVCTLGALGDVQI
IDGLGEEESKRFMHHYNFPPFSVGETGPMRAPGRREIGHGALGERALERVIPDEDTFPYT
IRLVSEVLESNGSSSQASICGSTLAMMDAGVPIKAPVAGIAMGLVKEEEDVTVLTDIQGM
EDALGDMDFKVAGTSEGITALQMDIKIEGITREVLQEALEQARNARMQVLKSMLDVISAS
RPELSAYAPKILTMYIKPDKIRDVIGPSGKMINQIIEDTGVKIDIEQDGTVYISSTDASA
NEKAKKTIEDIVREVEVGQIYEGKVKRIEKFGAFVELFKGRDGLVHISQLAKERVNKVED
VVKIGDTMNVKVTEIDNQGRVNLSRKALLSEE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagagcaacaagtattttccctcgatattggcggtcgcacgatgacctttgag
gttggaaaacttgccaaacaggcgaatggcgcggtgcttgtaaagtacggcgacagcgtt
gtgctcaccaccgcgaccggctcaaaagaaccaaaagacttgccattctttccattaacg
gtgaattatgaagagcgtttgtatgcagccggaaaaattcccgggggatttattaagcgg
gaaggacgcccgtcggaagcggccacgttgacgagcaggcttattgaccgaccgattcgc
ccattgtttcccgatggtttccgcaatgatgtccaggtgatcagcacggtgatgagtgtg
gaccaggacgcatctccggaactggcagcgatggttggatcttcgctggcgctctcgatt
tcggacatcccgtttgcgggccccatcgccggcgtggaaattgggcttgtcgatggcgaa
ttcgtcgtcaatccgacgagcgatcaggcggaaaacagcgaaatggagcttacggtagcg
ggaacgaaagatgccattaacatggtcgaagcgggtgccaacgaggtatccgaagaaaag
atgttggaagccattttgtttgcccatgaggaaataaaaagaattgtcacattccaagaa
gaaatcgtcgctcaatgcggcaaagaaaaaatggaagtgacgttgaaacaaccggatgag
ggtttggaagcagacgtccgacatcaagccgaggggcaactgaaagaagccgtgctcgtg
aaagaaaaacacgcgcgtgatgttgccattcaagaagtggaagcctccatcgtcgccaat
tttgacgaagaatatcacgaagatgtaaaggaaattttgcaaagctttctcaaaaaagaa
tttcgccgtttgatcacgaaagaaaatattcgtcccgatggacgaacacccgaagacatc
cgtgatctatcatctgaagttcagcttttgccgcggacccacggttcgggattatttacg
cgcggacaaacacaagccctcagcgtttgcacgttgggcgccctcggggatgtgcaaatc
atcgacgggctcggcgaagaagaatcgaaacgatttatgcaccattacaactttccgcct
tttagcgtgggcgagacaggcccgatgagagcgcccgggcgtcgggaaatcgggcacggc
gcacttggtgaacgggcattggagagagtcattcccgacgaggatacgtttccttacacg
atccgactcgtttccgaagttttggaatccaacggttcctcatcacaagcaagcatttgc
gggagcacgctcgcgatgatggatgccggcgttccaatcaaagcacctgttgccggaatt
gccatgggacttgtaaaagaagaagaggacgtaaccgtgttgaccgatattcaagggatg
gaagacgctctcggggacatggactttaaagtggccggaacatctgaagggattaccgcc
ttgcaaatggacattaagattgaaggcattactcgtgaagtgttgcaagaagcccttgag
caagcacgaaatgctcgtatgcaagtgttaaaaagcatgcttgatgtcattagcgcttcg
cgcccggaattgtctgcttacgcgccgaaaatcctcactatgtatatcaaaccggacaaa
atccgcgatgtgatcggaccgagcgggaaaatgatcaaccaaatcatcgaagatacaggc
gtgaaaatagatattgagcaagacggcaccgtctacatttcttcgacggatgcaagcgcg
aatgaaaaagcgaaaaagacgatcgaggacatcgtccgcgaggttgaagtcgggcaaatc
tacgaaggaaaagtgaaacgaattgagaaattcggagcttttgtggaattgtttaaagga
agagacggactcgtccacatttcccagctggcaaaagagcgggtaaataaagtagaggat
gttgtaaagatcggggatacgatgaacgtgaaagtgacggaaattgataatcaaggccgt
gtaaatctatcccgaaaagcgttgttaagcgaagaataa
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