Salicibibacter kimchii: DT065_03165
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Entry
DT065_03165 CDS
T05571
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
rue
Salicibibacter kimchii
Pathway
rue02020
Two-component system
rue02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DT065_03165
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DT065_03165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rue03021
]
DT065_03165
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rue02035
]
DT065_03165
Transcription machinery [BR:
rue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DT065_03165
Bacterial motility proteins [BR:
rue02035
]
Flagellar system
Flagellar assembly proteins
Stator
DT065_03165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
Pup
Motif
Other DBs
NCBI-ProteinID:
AXF55115
UniProt:
A0A345BVY4
LinkDB
All DBs
Position
complement(600501..601268)
Genome browser
AA seq
255 aa
AA seq
DB search
MERPTAMEDHWARWINEQDEQAAEAIMAAHSPLVDYHVQRIGATLPTNVDREDLRSQGMV
GLYDALLKFDHRRDLKFYTYASFRVRGAIIDSLRKEDWLPRSSREKAKMIDDTTERLEQQ
KGRHVTEHEVADALQLSIDDVLKTTAENYMAQLLSIDQTPEDENREDTHPLLVHDHQTLP
PHEEAEKNETKKQLQYLIATLPEKEKLVLSLFYHEELTLTEIGRTLRLSTSRISQLHAKA
LFRLKQAFQKEEAKI
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaccaactgcaatggaggatcattgggcacgatggatcaatgaacaagatgaa
caggcagccgaagcaatcatggctgctcattcgccgctcgtcgattaccatgtgcagcga
attggcgctacgcttccgacaaatgtggaccgtgaggatttgcggtcgcagggcatggtc
ggtttatacgatgcattgttgaagttcgatcatcgccgtgatttgaaattttatacgtac
gcgtcttttcgcgtacgcggggccatcattgacagtttacggaaggaagactggctgcca
cgctcttcgcgggaaaaggcaaaaatgattgatgatacgacggaaaggcttgaacagcaa
aaaggcaggcatgttacggaacatgaagttgcggatgcgcttcagctctccatcgatgac
gttttaaaaacaacggcggaaaattacatggcacagctcttatcaatcgaccaaacgccg
gaggacgagaaccgggaagatacccatcctttactcgttcatgatcatcaaacgctcccc
cctcatgaagaggcagagaaaaatgagacaaaaaaacagttgcaatatttgatcgcgacg
cttccggagaaagaaaaactcgttctctccctcttttaccatgaagagctcacattaacg
gaaatcggccgcacgttacggttgtccacttcaaggatttctcaacttcatgcaaaggcg
ttgtttcgcttaaaacaagcatttcaaaaagaagaagcaaaaatataa
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