Salicibibacter kimchii: DT065_07460
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Entry
DT065_07460 CDS
T05571
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rue
Salicibibacter kimchii
Pathway
rue03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DT065_07460 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rue03400
]
DT065_07460 (mutM)
Enzymes [BR:
rue01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DT065_07460 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DT065_07460 (mutM)
DNA repair and recombination proteins [BR:
rue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DT065_07460 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AXF55882
UniProt:
A0A345BY51
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All DBs
Position
complement(1493970..1494794)
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AA seq
274 aa
AA seq
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MPELPEVEIVRRTLTKLVQNKQIVDVEVGWPKMIKEPDDVDAFRFFLSGQTIRHIDRKGK
FLIFGLDDYALVSHLRMEGKYSLSDEAPTKHTHVRFFLHDNSELHYKDVRKFGTMHLFPK
GSELGVAPLAKLGPEPMNTSFKPSYLMEKFTKTTRNVKAVLLDQSVVAGLGNIYVDEALF
RAGIFPGVPATSLDEDAVVRVHRETIATLEAAIEAGGSSIRSYLNGNGEMGYFQQQLYVY
GRKGQLCKICEGEIERTVVAGRGTHYCPNCQPSE
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccggaagtagaaatcgtaagaagaacgttaacgaagctcgtacaaaat
aagcaaatcgtggatgtggaggtcggatggccgaaaatgataaaagaaccggatgacgtg
gatgcgtttcgtttcttcctctcgggacaaacgattcgacatatcgatcgaaaaggaaag
ttcttgatctttggcttggatgattacgcgctagtctcccatttacgaatggaggggaaa
tacagcctaagcgatgaagcgccaacgaagcatacccatgtacgtttttttcttcatgac
aacagtgaacttcattataaagacgtacgtaaattcggaacgatgcacttgtttccgaag
ggctcagaacttggtgttgcgccattggcaaagttagggccggagccaatgaatacttct
ttcaagccttcctatttaatggaaaaattcacgaaaacgactcggaatgtaaaagctgtc
ctccttgaccagtccgtggtcgccggtcttggcaatatatatgtggatgaagcgttgttt
cgggccgggatttttcccggtgttccggcaacttcgcttgatgaagacgcggttgtacgc
gtgcaccgggaaacgatagcgacattggaggctgccatcgaagccggaggttcttccatt
cgatcctatttaaacggcaacggggaaatgggatattttcaacaacaattgtatgtgtac
ggccgtaaaggacagctgtgcaaaatatgtgaaggggaaattgaacgaacagtcgtcgcg
gggcgtggaacgcactattgcccaaattgccaaccctcggaatga
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