Salicibibacter kimchii: DT065_07855
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Entry
DT065_07855 CDS
T05571
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rue
Salicibibacter kimchii
Pathway
rue03030
DNA replication
rue03430
Mismatch repair
rue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DT065_07855
03430 Mismatch repair
DT065_07855
03440 Homologous recombination
DT065_07855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rue03032
]
DT065_07855
03400 DNA repair and recombination proteins [BR:
rue03400
]
DT065_07855
Enzymes [BR:
rue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DT065_07855
DNA replication proteins [BR:
rue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DT065_07855
DNA repair and recombination proteins [BR:
rue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DT065_07855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF655
Motif
Other DBs
NCBI-ProteinID:
AXF55946
UniProt:
A0A345BYB5
LinkDB
All DBs
Position
complement(1574190..1577531)
Genome browser
AA seq
1113 aa
AA seq
DB search
MDSFVHLQVRSEYTLLESTCRIDTLVDRAASLGYSALALTDRNVMYGAHKFYKRCKERKI
KPLFGLELDVEVEEKAKGTLLLIAVNLTGYQQLMALSAQSQSRSETWVQADFFYRHSSHL
IVILPEERNPVASLDREHAREVIQAMRERIGPDRLYVGCLPAHLPESEERASWIAFADAM
KMKRVACGNVSFLSEEDKKWRRCLEAIRSNRPLEDVSPLEWREEHVLFSASYAEQAWAHD
DRAMTNTVAIADRCSVEPDQLQTTLPSPDHREERSRDALRKICFQGANERYGRLDKQVVE
RLEHELAVIEKIAFEDYFLIVWDFMAYARNAGVLTGPGRGSAAGSIVAYCLYITDVDPLA
YGLLFERFLNEARVSLPDIDIDFPDHRREEVIAYVRNKYGAAHVGQIITFGTFGPRAALR
DAGKALGTPQALIERLIRALPSSVATLTAARTSDPKLLELLKENEQANTLFQYAEAIEGL
PRHTSLHAAGVVLSARPLSEVVPTAGEGPLTVVTQFPMEDLEAYGLLKIDFLGLRNLTLL
EQLRDEVQRVESGTGEAPGGLPMDDPQTLEMLASGKTTGIFQFESTGMQQVLKKLKPTTF
EDLVAVNALYRPGPMEQIDVYIAGKHGRREVNYVHPDLAPMLSKTYGVIVYQEQVMQVAV
QIAGYSLAQADLLRRAVSKKDREELENEKASFVNGALANGYEEETATKIYAWILRFANYG
FNRSHAVAYSFIAYQLAYYKTHFPLVFFSAYLSMVENDKGRLGKAIRELKNQGLHLYPPA
VNKSTESFTAEEKGVRFPLQIITQVGRQVSRKLILEREKRGAFVSFINFCERTAHLPVNR
RMLANLIKAGAFDDLYSDRAKLLASTDRAFEFVDFERDLGQLFERGSGDFRYADATPFTQ
EEAYMYEKEVTGFYLSGHPLDKYEPLIAMRAPLALAEAEQAPVKTELWTMGAIEHIKQIR
TKNGQTMAFLQLSDESATCEVVLFPNVYRQVNHELEEQRYVFVRGKRTVDQYGNKIIADD
VIDVERAQDEAETVLYIKWTHESHTNEQSRRLKKMLQKIPGFSQVRVYNEKTNQLFAFDD
RYRVRINDELRSNVKLLVGEENVAERKRSESIS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
gtggattcatttgtccatttacaagtgcgaagtgaatataccttgctggagagcacgtgc
cgcatcgatacccttgtggaccgggcggcttctctcggttattccgcactggccctgaca
gatcgaaatgtcatgtacggtgcccataaattttataaacgctgtaaggagcgaaaaata
aaaccgctcttcggtttggaattagatgtagaggttgaagaaaaggccaaagggaccctc
cttttaatcgccgttaatctgacaggataccagcaactaatggcgttgtcggcccaatcc
caatcccgatcggaaacgtgggtgcaagcggattttttttaccggcatagcagtcatttg
atcgttattcttcctgaagagaggaaccccgtcgcgagcctggacagggagcacgcccgg
gaagttattcaagcgatgagggagaggatcgggccggatcgcttatacgtcggttgcctt
cccgctcatttacccgagagcgaagaacgtgcatcctggatcgcgtttgccgatgcgatg
aagatgaaacgggtggcgtgtgggaatgtttcttttttatcagaggaagataaaaaatgg
cggcgctgtttggaagccattcgcagcaaccggccccttgaagacgtaagtccattggag
tggcgggaggaacatgtgcttttttctgcttcttatgctgaacaggcgtgggcgcatgat
gatagagcgatgaccaataccgttgcaatcgctgatcgctgttcggtggaaccagatcaa
ctgcagacaacacttccctctcccgaccaccgcgaggagcgatcacgggatgcattgaga
aagatatgttttcaaggtgcaaacgaacgctacggccggttggacaagcaggtggtcgag
cgactggagcatgaacttgccgtcatcgagaagatcgcgtttgaagattattttcttatt
gtttgggatttcatggcttatgccagaaacgcaggggtcttaaccggtcccggccgtgga
tcggccgctggttcgatcgttgcttattgtctgtatattacggacgttgatccactagcc
tatgggctgctatttgaacgctttttaaatgaagcacgtgtttctttgccggacattgac
attgatttccctgatcatcgccgggaagaagtcattgcctatgtgcgaaataagtacggg
gccgctcacgttggacaaattattacgttcggcacctttggtccccgagccgcgctcagg
gacgcgggaaaagcgttaggaaccccacaagccctgatcgagcgactcattcgcgcgctt
ccttcatcggttgcaacgctaacagcagcaagaacgagcgatcccaagctgttagagctt
ttaaaggaaaatgagcaagcaaacacattgtttcagtatgccgaagcgattgagggtctc
cctcgccatacgtctttgcacgcggccggggtcgttctcagtgcccggccgttatcggaa
gttgtccctaccgccggtgaaggcccgttaaccgtggtgactcaattcccgatggaagat
ttggaagcctatggattgctgaaaatcgattttttggggttacggaatttaacgttgctg
gaacagcttcgcgatgaggttcaacgcgtggaaagcggaaccggcgaagctcccgggggg
cttccgatggatgatccgcaaacgctggaaatgcttgcgtcgggaaaaacgaccgggatt
tttcaatttgaatccacggggatgcagcaagtattaaagaaattgaagccgacaacgttt
gaggatttggtcgcggtcaatgctctatatcgtcccggtccgatggagcagatcgatgtt
tatattgccgggaagcatggtcgccgcgaggtgaactacgttcatcccgatttggcaccg
atgttgtccaaaacatacggcgtgatcgtttatcaggagcaagttatgcaagtagccgtt
caaattgcgggttactccttggcgcaagcggatttgctgcgcagggctgtgagcaaaaaa
gaccgtgaagagttggaaaatgaaaaggcatcttttgtcaatggtgcgcttgccaatggg
tatgaggaagagacggcaaccaaaatctacgcatggatcctgcgttttgccaactacggt
ttcaaccgcagccatgcagtagcttatagctttattgcttaccagcttgcttattataaa
acgcattttccgctcgttttcttctctgcctatctttcgatggtagaaaatgataaaggt
cggcttgggaaagccattcgcgagttgaaaaaccaaggtctgcatctatatccaccggcg
gtcaacaaaagcacggaaagcttcacggcagaggaaaaaggcgtgcgctttccattacaa
atcatcacgcaggtcggtaggcaagtaagcaggaagctcatactggaaagggaaaaaaga
ggagcgtttgtaagctttattaatttttgtgagcgcactgctcatttgccggtaaatcgt
cgcatgctcgccaatctcattaaagcaggcgcgtttgatgatctttacagtgatcgcgcc
aagttgctcgcgtccacggaccgagcgtttgaatttgtggatttcgagcgggatttgggc
cagctgtttgagcgggggagcggagattttcgctatgcggatgctacgccgtttactcag
gaagaagcctacatgtacgaaaaagaagtcaccggtttttatctgagcggacaccccctt
gataaatatgaaccgcttattgccatgcgcgcaccgttggcacttgctgaagcggaacag
gcacctgtgaaaacagagctttggacgatgggcgcgatcgaacatataaagcaaattcgc
acgaaaaacggacaaacgatggcgtttttacaacttagtgatgaaagcgccacttgtgaa
gttgtcctttttccaaacgtgtatcgacaagtgaatcatgaactggaggaacaacgttat
gtgtttgttcgcggaaagcggacggttgaccagtacggaaataaaatcattgccgacgat
gtaatcgatgtggagcgcgcgcaggacgaagcagaaacggttctttatatcaaatggacc
catgaatctcatacaaacgagcaatcccgccggctcaaaaagatgttgcaaaaaataccc
ggtttctcccaggtccgcgtatacaatgaaaaaacaaaccaattgtttgcgtttgatgac
cgctatcgtgtacgaatcaatgacgagcttcgctcaaacgtaaagctgctggtaggagag
gaaaacgttgcagaacggaaaagatcggagagcatctcttaa
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