Salicibibacter kimchii: DT065_09840
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Entry
DT065_09840 CDS
T05571
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
rue
Salicibibacter kimchii
Pathway
rue03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DT065_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rue03400
]
DT065_09840
DNA repair and recombination proteins [BR:
rue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DT065_09840
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DT065_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_16
AAA_22
AAA_23
Viral_helicase1
DnaJ_CXXCXGXG
ATPase_2
cobW
Septin
MMR_HSR1
Zn_ribbon_IFT122_C
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AXF56289
UniProt:
A0A345BZA8
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All DBs
Position
complement(1934466..1937336)
Genome browser
AA seq
956 aa
AA seq
DB search
MSKESISIKGARSHNLKGVDIAIPRDQLIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSQNPRSTVGTVTEIYDYFRLLFARVGVP
YCPNHNIPITSQSVQQMIDQLMGYPERTRIQILAPLEAERKGTHVKIFEDLKKKGFVRVR
VDGEIRDLSEDIALEKNKKHTIEVVIDRVIIKEGVESRLSGSLETGLEQSGGRVLIDVIN
GEEVLFNQHHACPYCGFSVDELEPRLFSFNNPSGACPTCEGIGSKLETDEELVVPNPSLT
LRQHAILPWMPTSSDYYPQLLAAACEHFGIDMDVPFEQLSTQEKKTLLHGNRKERIYFRH
DNEFGNVRERKIYFEGVLKNISRRYYSTSSDYTREQMEQFMVRKACQACQGHRLKDESLA
VLLNGKHIGEVTDLSIDSAKAYMDALDLSEKEMQIARLIIQEINNRLGFLSNVGIDYLTL
SRTAGTLSGGEAQRIRLATQIGSALMGVLYILDEPSIGLHQRDNMRLIRTLENMRDLGNT
VIVVEHDEDTMLAADHIVDIGPGAGLQGGYITAEGSPQTIRDHPESLTGNYLSGKKFIPL
PSRRRPTMERKITVKGANGNNLQNIDVDIPLGVFNVVTGVSGSGKSTLINDILRKSLSQK
LHRAKEKPAKHKKIEGTNELDFVVNIDQSPIGRTPRSNPATYTGVFDYIREVFAMTNEAK
VRGYKKGRFSFNVKGGRCEMCRGDGIIKIEMHFLPDVYVECEECGGKRYNRETLDIRYKG
KDIAEVLEMTVDEGVEFFENIPRIKRKLQTLKDVGLGYIKLGQQATTLSGGEAQRVKLAS
QLHRRTTGRSLYILDEPTTGLHMDDIRRLLQVLQRLVDNGDTVIVIEHNLDVIKTVDHII
DLGPEGGNGGGEIVATGSPETVAEVERSYTARYLKPILEREKQRMEALEMDEAVVK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggagagtatcagcataaaaggagcgcgttcccataacctgaaaggggtagat
atcgcgattccccgtgatcagttgatcgttttcaccgggttatccggttcgggtaaatcg
tcgttggcgtttgacacgatttatgccgaaggacaaaggcgatacgtggaatcattatcc
tcctatgcacgacaatttttagggcagatggataaaccggatgtagattcgatcgaaggg
ctgtccccggcaatatccattgatcaaaaaacgacaagccaaaatccgcgctctaccgtg
gggacggtcactgaaatctatgattattttcggctattattcgcacgtgtcggtgttccg
tattgtccgaaccataacattccgatcacttctcaaagcgtccaacaaatgatcgatcaa
ttgatgggttaccccgaacggacgcgtattcaaattctcgctccattggaagccgagcgt
aagggaacccacgtaaagatctttgaagatttaaagaaaaaaggatttgtacgcgtacgt
gtggacggggagatccgagacttgtccgaagatattgctttggaaaaaaataaaaaacac
actattgaagttgtcattgatcgggtaattataaaagaaggagtggaatcacgtctctct
gggtccctggaaacgggattggaacaatccggagggcgcgtgctcattgatgtcattaac
ggcgaagaagtgttgtttaaccaacatcatgcttgcccgtattgcggattttccgttgat
gaattggagccacggttgttttcgtttaacaacccgtctggtgcttgtccgacctgtgaa
ggcattggctctaagctggaaaccgatgaagagttggtcgtcccaaacccatctctcacc
ttgcggcaacatgccattctcccatggatgccgacgagttccgattattatccgcaactg
ctcgctgccgcctgtgaacattttggtatcgacatggatgtcccgtttgaacagctgtcc
acacaagagaaaaaaacattactgcatggcaaccggaaagaacggatctattttcggcat
gacaatgagtttggaaatgtaagagaacgaaaaatttattttgaaggcgtcttgaaaaat
atctccagacgatattattccacctcatcggattatacgcgcgaacaaatggagcagttt
atggttcgaaaagcttgtcaagcatgtcaaggccatcggttaaaagatgaatcacttgct
gttttacttaatgggaagcatatcggagaagtgacagatttatccattgacagcgccaaa
gcatatatggatgcgcttgatttatccgaaaaagagatgcaaattgcccggctcatcatc
caggaaattaataaccgtttgggatttttaagtaacgtaggcattgattatttaacgcta
agccgaacggctgggacactgtccggcggtgaagcgcaacgcattcggctggctacgcaa
atcgggtctgcgctaatgggagttctttatattctagatgaaccttccatcggcttgcac
cagcgcgataacatgcgattaattcgtacgcttgaaaacatgcgcgatctcgggaacaca
gtgatcgttgtggaacatgatgaagatacgatgctcgcggcggatcatattgtggatatc
ggtcccggtgctggtttgcaaggagggtatattactgcagaaggatctccgcaaacgatc
cgagaccatcctgaatccctcacaggcaactatttatccggaaaaaaattcattccttta
ccgtccagacgccgtccaacgatggagcgcaaaattacggttaaaggggcgaacgggaac
aacttgcaaaatatcgacgtcgatattccgctcggtgtttttaacgtcgttaccggcgtt
tccgggtccgggaaaagtacgctcattaatgatatattacgaaaatccctttcccagaag
ttgcatcgcgcgaaagaaaaaccggcaaaacataaaaaaatcgaagggactaatgagctt
gatttcgtcgtaaacattgaccagtcaccgatcggacgaacgccacggtccaatccggcg
acgtacaccggggtgtttgattatatccgcgaggtattcgccatgaccaacgaggcgaag
gtgcgaggctataaaaaggggcgcttcagctttaatgttaagggcggccgttgcgaaatg
tgccggggagatggcattattaagatagagatgcactttttacccgatgtgtacgtggaa
tgtgaagaatgtggcggaaaacgttacaatcgggaaacgttagatatccgctacaaaggg
aaagatattgcggaagtattggaaatgaccgtcgatgaaggcgtggagtttttcgagaac
atccccagaatcaaacggaaattgcaaacgttaaaagacgtgggccttgggtatattaag
cttggacaacaggccacaacgctatctggcggggaagctcagcgagtgaaattagcctct
caactgcatcgacgcacaaccggccgctccctttacattttggatgaacctacgaccggc
ctccatatggatgacattcgccgtctattgcaagtattgcagcgcctcgttgataatgga
gacacagtcatcgttatcgagcataacctggatgtcattaaaacggtggatcatattatt
gatctggggcctgaagggggaaatggtggcggtgaaatcgtcgcgacaggctcccccgaa
acagtagccgaagtggaacgctcatacaccgcccgatatttaaagccgatcttagagagg
gaaaaacaacggatggaagcgttggaaatggatgaagccgtcgtgaagtga
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