Salicibibacter kimchii: DT065_18235
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Entry
DT065_18235 CDS
T05571
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
rue
Salicibibacter kimchii
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rue03019
]
DT065_18235
Messenger RNA biogenesis [BR:
rue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DT065_18235
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AXF58064
UniProt:
A0A345C4D3
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All DBs
Position
3566385..3567326
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AA seq
313 aa
AA seq
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MEKGIYYTKAGDKIDRHLLIRQATRGIASNGKPFLTLRLSDNSGDIEAKLWGVRPEDERT
YTGKTIVYVQGEVFDYRGRLQLKIARIRPVNDQEQIKMEDLVPTAPMEKLDMLERVNEFV
FDIGNAKIQRMTRFLIKKYQYAFLDVPAATRNHHEFMSGLAYHVVCMLQIAQSVVQLYPS
LNKDLLYAGIILHDLGKVRELSGPIDTEYTTEGKLIGHISLMAAEIRQTASELNIEGEEP
MLLEHLILSHHGKGEWGSPKSPLLREAEILHYIDNLDAKLNMMDRALGKTEAGHFTERIP
ALENRSFYKPKNM
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggaatttattacacgaaagccggcgataaaattgatcgccatttgctcatt
cgtcaagcgactcgaggaatagccagtaacggaaaaccgtttctaacgttgcgattatcg
gataatagcggtgatattgaggcaaaattatggggggtcagaccggaagatgaacgcacg
tataccggaaaaacgatcgtgtatgtgcagggagaagtctttgattatcgcgggcgtttg
cagttaaaaattgcccggatacgaccggtaaatgatcaagagcaaataaagatggaggat
ctcgttccgacagcccctatggaaaaactggatatgctcgaacgcgtcaatgagtttgtt
tttgatatcgggaacgcaaaaatccaacgtatgacacgttttttgattaaaaagtaccaa
tatgcatttttggacgtgccggcagccacgagaaatcaccatgagtttatgtctggcctt
gcctatcacgtcgtgtgtatgctccaaatcgcccaatcggttgtgcaattgtatcccagc
ttaaacaaagatttgctttatgccggcatcattttacatgatctcggcaaagtgcgggaa
ttatccggaccaattgacacggaatatacgacggagggcaaactgatcggacatatctcc
ttgatggctgcagaaatccggcaaacagcctctgagttgaacattgaaggggaagaaccg
atgttgcttgaacacctcattttaagtcaccacggaaaaggggagtggggaagtccgaag
tctccacttttacgagaggcggagatcctgcactatatcgataatcttgatgcaaaactg
aatatgatggatcgggccttgggaaaaaccgaagcgggtcatttcacagagcgtattccc
gctttggaaaatcgctcattttacaagccgaaaaatatgtaa
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