Salicibibacter kimchii: DT065_18525
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Entry
DT065_18525 CDS
T05571
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rue
Salicibibacter kimchii
Pathway
rue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DT065_18525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rue03400
]
DT065_18525
Enzymes [BR:
rue01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DT065_18525
DNA repair and recombination proteins [BR:
rue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DT065_18525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
Helicase_RecD
UvrD_C
AAA_28
SLFN-g3_helicase
AAA_16
HHH_5
AAA
AAA_12
DEAD
nSTAND3
T2SSE
NACHT
NPHP3_N
NTPase_1
cobW
AAA_23
AAA_29
RecR_HhH
KTI12
Mg_chelatase
Zeta_toxin
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AXF57769
UniProt:
A0A345C3I8
LinkDB
All DBs
Position
3622515..3624794
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AA seq
759 aa
AA seq
DB search
MNEEWKAAMDKITGVVSHLIFRNEKNGYTVLNIRIDDATPSVDVSSITVVGHFPFPPEED
LLTFYGQFHEHERYGQQFNMEFYEPYIPEGKPAVIQYLSSERFPGIGKKTASRVVAELGE
AAIDKILHQPSLLYDIPNIKRQQADILTERLMEEQEIAGVMSRLITYGFGTELATKIIQA
YKGETLNVVEKDPYQLVQDIEGIGFQKADALGVQLGIAPTEKKRLRAGLLFSLWQMSQSV
GHVYLPCDVWIEEALKVLNYRNLEVDAAMLQKEIEELDEEGKVAVLDERAYLLSLFFAEK
GLATNVNRLLNTEVQETFAEDLYLKTLGELENDFKITYADRQKEAVELALKSPLMILTGG
PGTGKTTVIRAIVDIFKRMRGWNERKEKKLPVLLAAPTGRAAKRMAEATGLKAFTIHKWL
GWRGEEEEFLEHDEENPLEGELLIIDEASMIDLWLANQLFKAIPAGMQVIIVGDEDQLPS
VGPGQVLGDLLRSEKVPAISLSSVYRQAEGSSIIDLAHDLKEGKLSADIKETKPDRSFIA
CHGTSMPDVILQICQKAMDKGYPARDIQVLAPMYKGTAGIHLLNEKLQALFNPPKQGKRS
MTYGDVTFRNGDIVLQLVNNPEDNVFNGDRGEIIALLKEKETEDGKEKLVVKFDGIEVYY
EKQDLKQITLAYCSSIHKAQGSEFPIVIVPLSMSYRRMLKRNLLYTAITRARDSLIMVGE
QRAFALAVETNDQHSRYSHLHLRIQEASTNHENVKEEQY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggaatggaaggcagcgatggacaaaattaccggcgtggttagccaccttatt
tttcgaaatgaaaaaaacggctatacggttttgaacatccgcattgatgacgcaactcct
tccgtcgatgtctcctccattacggttgtcggtcattttccctttcctcccgaagaagat
ctgttgacgttttacggacaatttcacgagcatgaacgttatggccaacagttcaacatg
gaattttacgaaccgtatattcctgaaggcaagcccgcggttattcagtatttatccagt
gagcgtttccccggtatcggaaagaaaaccgcgtcccgtgtcgttgccgaactaggggaa
gcagcgattgataaaatcctccatcagcctagccttttgtacgacattccgaacattaaa
cgtcaacaagcggatatcctcaccgagcgattaatggaagaacaggagatcgccggggtg
atgagccgcttgattacatatgggttcggtacggaattggcgacaaaaatcattcaggct
tataagggcgagacgttaaacgtcgtggaaaaagacccttatcagctcgtgcaagacatt
gaaggcatcggttttcaaaaggccgatgcgcttggtgttcaattgggcatcgccccgacg
gaaaagaagcggctgcgggcaggattgctattttcactgtggcaaatgtcccaaagcgtc
gggcatgtctatttgccgtgtgatgtatggatcgaagaggccttgaaagtgctgaattat
cgaaaccttgaagtggatgccgcgatgttgcaaaaggagattgaggaacttgacgaagag
gggaaggttgctgttctggatgaacgggcttacctattgtcgctctttttcgcggaaaag
gggttagcaacgaatgtgaaccgtttgttaaacacggaagtacaagaaacgtttgccgag
gacctctatttgaaaacattgggagagctggaaaatgattttaaaatcacatacgccgat
cgtcaaaaagaagcggtggagctcgccttaaaatctccgctcatgattttgaccggaggc
ccgggaacgggaaaaacgacggttattcgtgcaattgtggatatattcaaacgcatgcgc
ggctggaacgagcgaaaagaaaaaaagcttcccgttcttctcgccgcgcctacgggcaga
gccgcgaaacggatggcagaagcaaccggcctaaaagcttttactattcataaatggctg
ggctggcgcggtgaagaagaggaatttcttgagcatgatgaagaaaatccgctcgaaggg
gagctattgattatcgatgaagcatccatgattgatctatggctcgcgaatcaactattt
aaagcaataccggccgggatgcaagtgattattgtcggtgatgaagatcaattgccctcc
gtgggtccggggcaagtactcggggatttgttgcgatcggaaaaagttccggcgatatcg
ttgtcgtcggtttaccgccaagcggaaggctcctcgatcatcgatttggcgcatgattta
aaagagggaaagttatccgctgatattaaagaaacgaaaccggatcgatcgttcattgca
tgtcacggaacgagcatgcctgatgtcatccttcagatttgccaaaaagcgatggataaa
gggtaccccgcgcgtgatattcaagtgcttgccccgatgtataaaggaaccgcggggatt
catttgctgaatgaaaaattgcaagccctttttaatcctccgaagcaggggaagcggtcc
atgacatatggcgacgtcacttttcgcaatggcgatatcgtcctgcagcttgtgaataat
cccgaagacaatgtttttaatggggaccgcggcgaaatcatcgcgcttcttaaagaaaaa
gaaaccgaagacggcaaagaaaaacttgtcgttaaatttgacggcattgaagtttactat
gaaaaacaggatttaaaacaaatcacactcgcttactgctcctcgattcataaagcccag
ggaagcgaattcccgattgtaatcgtcccgttatccatgtcttaccgtcggatgttaaaa
agaaatttgctttataccgcgattacgagagcgcgcgactccttaatcatggtcggcgaa
cagcgggcatttgcattggctgttgagacgaatgatcaacatagccgctattcccacttg
caccttcgtattcaggaagcaagtaccaatcatgaaaacgtcaaggaagaacaatactaa
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