Ruficoccus sp. ZRK36: K0V07_05235
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Entry
K0V07_05235 CDS
T07427
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi01501
beta-Lactam resistance
rufi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K0V07_05235
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0V07_05235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rufi02000
]
K0V07_05235
01504 Antimicrobial resistance genes [BR:
rufi01504
]
K0V07_05235
Transporters [BR:
rufi02000
]
Other transporters
Pores ion channels [TC:
1
]
K0V07_05235
Antimicrobial resistance genes [BR:
rufi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0V07_05235
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
K0V07_05235
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
K0V07_05235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QYY36880
LinkDB
All DBs
Position
complement(1186008..1187552)
Genome browser
AA seq
514 aa
AA seq
DB search
MAPSVHFSPFTRGWLSRLVPIGLLGLLAGCALQDAPKNPEILNTTATELVIPKQWAEGVS
SEGEVVVNWPDSFQDPQLNELIQQALAYNTNLQAAEARMQQAASGVAVAGSALYPNLAGD
GKAGTHLGGANGGLRGWLVSSTWELDVWGRVRYGRRAAMEEYVSAQYDIAYARQSLVAEV
ATGWFLAKQARQQTLILENVIKASEELVEIAKTRWDVGSGNEQDYLTAKASINEFRSELE
QTRLAYKSAVRALEVLVGHYPAAQLDVTPELPDTLEPIPTGLPAELLDRRPDILAAERNV
ASKFNLVGSARAARLPKINLTAAVASLSSNFYQLQNISDPLINVGANLIAPIYMGGELQA
RQEGASAQQREAMAQYATAVLNAFKEVETTLNTLETLEQQSSYLNTVVDDTSRTLKLAEL
QYEVGQTGMYYVTQLQVDLSEAQLNLLSVRTQACINRVQLHLVLGGDFGMPETDEEAIDG
PANPFNISGLMPEKSTAQHTPDTQEAETAPTTVN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtggccccgagcgttcatttttcaccttttacacgcggatggctttcccggctcgttccg
atcgggctgcttggcctgctcgccgggtgtgccctgcaggacgcccccaagaacccggaa
atcctcaacactaccgccacggagctggtgatccccaagcaatgggcggagggcgtcagc
agtgagggcgaggtagtcgtaaactggcccgactcctttcaggacccgcagctcaatgag
ctgatccagcaggcactggcctacaacacgaacctccaggccgctgaggcacgcatgcag
caggccgccagtggagtagccgttgccggctcagccctctacccgaacctcgccggagac
ggcaaagcgggcacccacctgggcggtgccaacggtggtctgcgcggttggctggttagc
tccacctgggagctcgatgtgtgggggcgtgtccgctacggacgccgtgccgcgatggag
gagtacgtctccgcacagtacgacattgcctatgcgcggcagtctctcgtggccgaagtc
gccacagggtggtttctcgccaagcaggcccgccagcagacacttatcctggaaaatgtg
atcaaggctagcgaggagctggtggaaatcgccaagacgcgctgggatgtcggctcgggt
aatgagcaggactacctcaccgcgaaagccagcatcaatgagtttcgcagcgagctggag
cagacccgcctcgcgtacaagtccgcggtgcgggcgctggaagtcctagtcgggcactac
ccggctgcgcagttggacgtcacccccgagctgcccgatacgctggagcccatccccacc
ggactgcccgcagagctgctggaccgccgcccggatatcctcgccgccgagcgcaacgtc
gcctcgaaatttaacctcgtcggatcagcccgcgcggcccgcctgccgaagatcaacctg
accgccgcagtcgcctcgctctccagtaacttctaccagctgcaaaacatctccgacccg
ctgatcaatgtcggagcgaaccttatcgctcctatctatatgggtggtgagctgcaggcc
cgccaggaaggcgcaagcgcccaacagcgcgaagccatggcccagtacgccacagcggtg
ctcaacgccttcaaggaagtcgagacgaccctcaacacgctggaaacactggagcagcag
agctcctacctgaacaccgtggtcgacgacacctcgcgcacgctcaagctggccgagctc
cagtatgaggtcggacagaccggcatgtactacgtgacgcagctccaggtggacctgagc
gaggcccagctcaacctgttgtccgtccgtacccaggcttgtatcaaccgggtgcagctc
catctcgtgctcggaggcgacttcggaatgcccgagaccgacgaggaggccatcgacggc
ccggccaatccctttaacatctccggcctgatgcccgagaaaagcaccgcccagcatacg
cccgacacgcaggaggccgaaacggctccgaccacggttaactaa
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