Runella sp. SP2: DTQ70_24260
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Entry
DTQ70_24260 CDS
T05690
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
rup
Runella sp. SP2
Pathway
rup01501
beta-Lactam resistance
rup01503
Cationic antimicrobial peptide (CAMP) resistance
rup02020
Two-component system
rup03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DTQ70_24260
09132 Signal transduction
02020 Two-component system
DTQ70_24260
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DTQ70_24260
01503 Cationic antimicrobial peptide (CAMP) resistance
DTQ70_24260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rup02000
]
DTQ70_24260
02044 Secretion system [BR:
rup02044
]
DTQ70_24260
01504 Antimicrobial resistance genes [BR:
rup01504
]
DTQ70_24260
Transporters [BR:
rup02000
]
Other transporters
Pores ion channels [TC:
1
]
DTQ70_24260
Secretion system [BR:
rup02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DTQ70_24260
RTX toxin transporter
DTQ70_24260
Multiple protein transporter
DTQ70_24260
RaxAB-RaxC type I secretion system protein
DTQ70_24260
Antimicrobial resistance genes [BR:
rup01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
DTQ70_24260
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
DTQ70_24260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SHOCT
Motif
Other DBs
NCBI-ProteinID:
AYQ35083
UniProt:
A0A3G3GUR2
LinkDB
All DBs
Position
complement(6013570..6014868)
Genome browser
AA seq
432 aa
AA seq
DB search
MKKLILACISLLLGSPHGFSQTVISTVNEAIELAKKQNADLLISQQNARIQSWNVTAAQS
ARIPQLKFTTALDYNFVLPTQLIPAQFFGGKEGEFRGVQFGVPFNLTAGLEASAPLWNAG
LKQDIQLAQQNQKLTDLQTLVLTDDLSTQVARLYFATVFTQQYLGLLQRNLANADSIVAI
ARERKDKGLIDQLEYNRSRATRLSVEDVLKQNELAYAKNLNQLRLLLHTQDLTLAPYILP
ASLPTVKESVGESHPKLQLRAQQLVVAQAQLKKEKLLRLPTLSAFARYQEQAQRSAFNFL
NFNEKWYGIGVTGLRFEVPIYTARLRESAIGRAQVNADIAQLQLDNEKRKFQTETDELLL
NYRQAVSSLKTNEEAYQLSQENLQLVLIKYRGGILSYDQYLNVFNEALNAQNKYLRTLAD
VMINAKLLELRN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctcattcttgcctgtatttcgttgttgttagggtctcctcatggcttcagc
caaacggtcatttcgacggtcaacgaagccatcgagctggccaaaaagcaaaacgccgac
cttctgatttcccaacaaaatgcccgcatccagtcttggaacgtcaccgctgcccagagt
gcgcgtattccccaacttaaatttacaaccgcattggattacaactttgtgttgcctact
cagcttattcctgcgcagttttttggaggaaaggagggagagtttcgcggcgttcaattt
ggggttccgtttaacctcaccgctgggctcgaagccagcgccccgctttggaatgcagga
ttaaaacaagatattcagcttgcccaacaaaaccaaaaactaactgatttacaaacgctt
gtactcaccgacgacctcagcacgcaagtcgctcgtttgtactttgctacggtgtttacc
caacaatacctcggcctgctccaacggaacttagccaatgccgacagcatcgtggcgatt
gcgcgagaacgcaaagacaaaggactcatcgaccagctcgaatacaaccgcagccgagcc
acacgcctcagtgtggaagatgtgttaaagcaaaatgaattggcgtatgccaaaaatctc
aaccaactgcggttgctgctccatacccaagacttgacgttggctccgtatattcttcct
gcttcattaccgacagtcaaagaaagcgtaggagaaagtcaccccaaattgcagcttcgt
gcccagcaactcgtggtagcccaagcccaactcaaaaaagaaaaattactccgcctgccc
actttatcggcctttgctcgctaccaagaacaagcacaacgttctgcgtttaatttcctg
aatttcaacgaaaaatggtacggcatcggcgtcacgggtcttcgctttgaagtgcccatc
tatacggctcgccttcgcgagagcgccatcggacgcgcgcaggtgaatgcagacatcgcc
caacttcaacttgacaacgaaaaacgaaagtttcagaccgaaaccgatgagcttttactc
aactaccgccaagcggttagttcactgaaaaccaacgaagaagcgtatcaattgagccaa
gaaaatttgcaattggtgcttatcaaataccgaggcggaattttgagctacgaccagtac
ctcaacgtatttaacgaagccttaaacgcccaaaacaagtacctgcgcaccttggccgat
gtgatgattaacgcaaaattgctagagttgagaaactaa
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