Rhodomicrobium vannielii: Rvan_0053
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Entry
Rvan_0053 CDS
T01353
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
rva
Rhodomicrobium vannielii
Pathway
rva01501
beta-Lactam resistance
rva01503
Cationic antimicrobial peptide (CAMP) resistance
rva02020
Two-component system
rva03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Rvan_0053
09132 Signal transduction
02020 Two-component system
Rvan_0053
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rvan_0053
01503 Cationic antimicrobial peptide (CAMP) resistance
Rvan_0053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rva02000
]
Rvan_0053
02044 Secretion system [BR:
rva02044
]
Rvan_0053
01504 Antimicrobial resistance genes [BR:
rva01504
]
Rvan_0053
Transporters [BR:
rva02000
]
Other transporters
Pores ion channels [TC:
1
]
Rvan_0053
Secretion system [BR:
rva02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Rvan_0053
RTX toxin transporter
Rvan_0053
Multiple protein transporter
Rvan_0053
RaxAB-RaxC type I secretion system protein
Rvan_0053
Antimicrobial resistance genes [BR:
rva01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Rvan_0053
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Rvan_0053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADP69343
UniProt:
E3I4Y9
LinkDB
All DBs
Position
57586..59196
Genome browser
AA seq
536 aa
AA seq
DB search
MPLQRLSSRFVRASRTLCSALALSIAFGAPVSAESLKEALTAAYLYNPTLKAARAQLRST
DNQVARAKSGYRPRVNATLQAGRADTRTRYDNSGVDAGTLAACLNTDCSIDPTGQGLAPV
SVGTLSNLEASNGVYSPRTARIAVQQNVFDGFRTYNNIKGAEAAVEAGREDVRNSEQTML
LNAVTSYMDVVRDQAIVNLRQSNVRVLAEQLRATEDRFKVGEVTRTDVAQAQSGLAQSQA
DLSIAQGTLYGDQARFAQYIGHPPGTLRDPGPATNLLPKTLDDAIAVAQSENPLILSSLF
RERAQQHQVKQVKGELLPNLAVEASYTKGAQTQSPLINQYDDARVVGTLNIPIYEGGEVS
ARIRAEIETLSQRRQQIDESREIARQQVSSAWGLLIAAKGNVAAGEAAVEATRIALQGVR
EEERVGQRTLLDVLNSEQQNLNAQVNLVSYRRDLVVASYSVLSGMGRLTASDISLQAELY
DPTRYYSQVKDTWYGWGASVESQEDPRVAPVEDPGLLPGQDSGDGPAYTQKLPQIP
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgccgttacaacgtctttcctcccgtttcgtcagagcgtccaggaccctttgctcggcc
ttggccttgagcattgcgtttggagcgcctgtcagcgccgagagcctcaaggaagcgtta
acggccgcctatctatacaatccgacgttgaaggccgcgagggcgcagttgcgctcgacg
gataaccaggttgcgcgcgccaagtcgggctacaggccgcgcgtcaacgccacgcttcag
gccggccgcgccgatacgcgcacgcggtatgacaacagcggcgtcgatgctgggacgctc
gcggcctgcttgaatacggattgcagcatagatcctactggtcaggggttggcgccggtt
tcggttggcacgctaagcaacttggaagcttcaaacggcgtctacagcccgcgcacggcg
agaatcgcggtgcagcagaacgtgttcgacggattccgcacctacaacaacatcaagggc
gctgaagccgccgtcgaagcaggccgcgaggacgtccgcaattccgagcagaccatgctc
ctcaacgcggtaacgtcctatatggacgtggtgcgcgatcaggccatcgtgaacctccgc
cagagcaacgtgcgggtgctggccgaacagctgcgcgccaccgaagaccgcttcaaggtc
ggcgaggtgacgcgcaccgacgtggcgcaggcgcagtccggtcttgctcagtcgcaagcc
gacctgtctatcgcgcaaggcacgctctacggcgaccaggcccgattcgcgcagtatatc
ggccacccgccgggaacgctgcgcgatcccggtccggccaccaacctcctgccgaagacg
ctcgacgatgccatcgctgtcgctcagtcggaaaacccgctgattctctcttccctgttc
cgcgaacgagcgcagcagcatcaggtcaagcaggtgaagggcgagcttctgcctaacctt
gccgtcgaggcgagctacacaaagggcgcgcagacgcagagcccgctgatcaaccagtat
gacgatgcgcgcgtcgtcggtacactcaacatcccgatctacgaaggcggcgaggtttca
gcccgcatccgcgccgagatcgagacgctgtcccaacgccgccagcagatcgacgaatcg
cgcgaaattgcccgccagcaggtcagctcggcatggggccttctgatcgccgcgaagggc
aacgtcgccgctggtgaggccgctgtcgaagccacgcggatcgcgcttcagggcgtgcgc
gaggaagagcgcgtcggccagcgtacgctgctcgatgtgctgaactccgagcagcagaac
ctgaacgcgcaggtcaatctcgtgtcctaccgccgcgaccttgtcgtcgcgtcctactcc
gtgctctcaggcatgggacgccttactgcctccgatatctcgcttcaggcggaactttac
gatcccacccgctattacagccaggtcaaggatacgtggtacggctggggcgcctccgtt
gaaagccaggaagacccacgcgtcgctcctgttgaagatccgggcctccttccgggccag
gattcgggcgacggccccgcttatacccaaaaactgccgcaaatcccgtga
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