Rahnella victoriana: J9880_11580
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Entry
J9880_11580 CDS
T07871
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rvc
Rahnella victoriana
Pathway
rvc01501
beta-Lactam resistance
rvc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J9880_11580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J9880_11580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvc02000
]
J9880_11580
01504 Antimicrobial resistance genes [BR:
rvc01504
]
J9880_11580
Transporters [BR:
rvc02000
]
Other transporters
Pores ion channels [TC:
1
]
J9880_11580
Antimicrobial resistance genes [BR:
rvc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J9880_11580
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
J9880_11580
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
J9880_11580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UHM88986
LinkDB
All DBs
Position
complement(2497730..2499133)
Genome browser
AA seq
467 aa
AA seq
DB search
MNKPHFALSLIGAFSLTLLAGCTMEPDYQRPALPVASHWDGAHTAAAQDIGWKAFFNEPA
MNQLIGMSLGNNRDLRVAALNVDTARAAFQIDRAALLPTLDASAGETNQHLPGGLYSTQS
TGPVTYQQYSANLGVTSYEVDLFGRVRSLRDQGLETFLATEATQRATQISLVSEVASGYL
SLAADNDLLKLAISTADSQNKSYELTKRSYDSGISTSQDLVQAETTVRAAQADIAQYTRQ
VRQDVNALTLLVGTTIPQNLLANATLQQDWKFPQTPAGLPSDLLTRRPDIIAAEHTLKAA
NANIGAARAAFFPSITLTGTAGSESGSLSKLFDGGTGAWSFMPSINIPIFDGGVNQANLD
IAKDTKKIDIANYEKAIQTAFKEVSDGLAGQATYKDELLARQQDADANQRNYDLSQMRFK
GGVDNYLSVLVAQRSLYSAQQTLITTQLAQLNQDISLYKALGGGWKE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccgcatttcgcgctgtcgcttatcggcgcgttttcactcaccctgctggcg
ggctgtacgatggagccggattatcagcgtcctgcgctgccggtcgccagccactgggac
ggtgcccacaccgccgccgcgcaggatatcggctggaaggcgttcttcaatgaaccggcg
atgaatcagctgattggcatgtctctcgggaacaaccgcgaccttcgggtcgcggcgtta
aacgtcgatactgcccgcgcagccttccagattgaccgcgccgcgctgctgccgacgctc
gacgccagcgccggtgaaaccaaccagcatctgccgggcggactgtattcgacacaaagc
accgggccggtgacctatcagcaatacagcgccaatctcggcgtgacgtcctatgaagtg
gatctgtttggccgcgtgcgcagcctgcgtgatcagggtctggaaaccttcctggcgaca
gaggcgacgcagcgcgcgacgcaaatctcgctggtgtctgaagtggcttccggctacctg
agcctggcggcggataacgatctgctgaaactggcgatcagcaccgccgacagccagaac
aaatcctacgaactgaccaaacgcagctacgattccggcatcagcacctcgcaggatctg
gtgcaggccgaaaccacggtacgcgcggcacaggccgatatcgcgcaatatacgcgtcag
gttcgtcaggatgtgaacgcgctgacgctgctggtcggcaccaccattccgcagaatttg
ctggcgaacgccaccctgcaacaggactggaaattcccgcagacaccggccggattaccc
tctgatctgctgacccgtcgtccggacattattgccgcggaacatacgctgaaagcggct
aacgccaatatcggcgcagcgcgtgcggcgttcttcccgagcattacgctgaccggcacc
gccggttccgaaagcggcagcctgagcaaactgttcgacggcggcaccggcgcgtggtca
tttatgccatccataaacatcccgatcttcgacggcggcgtgaatcaggccaatctcgac
atcgcaaaagacactaagaaaattgatatagccaattatgagaaagcgattcagacggcg
ttcaaagaagtgtccgacggcttagccggacaggcgacttacaaagacgaattgctggcc
cgccagcaggacgccgacgccaaccagcgcaactacgatctctcgcagatgcgcttcaaa
ggcggagtcgacaactacctgagcgtactggtcgcgcaacgctccctctattctgctcag
caaacgctgatcaccacccagcttgcccaactgaatcaggacatcagtttgtataaagca
ttagggggcggctggaaggagtga
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