Rahnella victoriana: J9880_16870
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Entry
J9880_16870 CDS
T07871
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rvc
Rahnella victoriana
Pathway
rvc01501
beta-Lactam resistance
rvc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J9880_16870
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J9880_16870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvc02000
]
J9880_16870
01504 Antimicrobial resistance genes [BR:
rvc01504
]
J9880_16870
Transporters [BR:
rvc02000
]
Other transporters
Pores ion channels [TC:
1
]
J9880_16870
Antimicrobial resistance genes [BR:
rvc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J9880_16870
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
J9880_16870
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
J9880_16870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF4094
Motif
Other DBs
NCBI-ProteinID:
UHM89962
LinkDB
All DBs
Position
3646242..3647636
Genome browser
AA seq
464 aa
AA seq
DB search
MNKLNLLSMAVMTLLLTGCGQALKSEYQRPMLSVPPTWRVQDTGEGVAKFSPHWWDNFDD
PQLSRLIVSALQSNNDLALAGIKLRQALLTAGLSDLNQTPDFSASASASNTKNMRRDTTP
VESYANSLSASYELDLWGKLARTREQSDWLAKASEQDLQATALTLIGTTSQLYWQIASLN
QQISNLQQSLAIARETQVMVTSRWKAGDLGQLDYLQAQQTVLSRENNLRDLYQQRDENRN
ALAILLSRPPGQYPAERQSLDIHQSVPVAQRLPLDVIARRPDVQSAELNLRAALAGSDVA
RLSFYPSLTLNASLNAGASVFQQWFSNPARTLGSALDLPFIEWNKVRLTVEQSGLDVQTA
AIQFRSASYSALQDIDNAMSQRLTYQQEKQRQLQDLALSQQRLALVESQYRHGSVVYQTL
LDAQNTLLDSQNTLVTTQYNYLYSTMKLWLALGGGEDNTLSQQG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactgaatttactctcaatggcggtgatgacgttactgctgaccggctgtggt
caggcgctgaaaagcgaataccagcggccgatgctgtcagttccgccaacctggcgcgtg
caggataccggcgaaggcgtggcgaaattttctccgcactggtgggataactttgatgac
ccgcagttgtcacggctgattgtttccgcattgcaaagcaataacgatctggcgctggcg
ggcattaaactgcggcaggcgctgctgacggcgggactctcagatctgaatcagacccct
gatttctccgccagtgcatcggccagcaacaccaaaaatatgcgccgcgacaccacgccg
gtcgaaagttacgcaaactcactgtcggcctcttatgagctggatctgtggggaaaactg
gcgcgcacccgtgagcagtccgactggctggcaaaagcctcggaacaggatttgcaggcc
acggcgctgacgctcattggcacgacttcacagctttactggcagattgccagcctcaat
cagcagatcagtaatttgcagcaaagtctggcgattgcccgggaaacgcaggtgatggtg
acctcgcgctggaaggccggtgatctcggtcagctggattatttgcaggcacagcaaacg
gttttgagccgcgaaaacaacctgcgcgatttgtatcaacagcgcgatgaaaaccgtaat
gcactggcgattttactcagccgcccgccggggcaataccctgcggagcgtcagtcgctg
gatattcatcagagcgtgccggtggcgcagcgtttaccgcttgacgtgatcgccagaagg
ccggatgtacagtcggctgaactgaatctgcgtgcggcgctggccggttcggacgtcgcc
cggctgagcttttatccgtcgctgacgctcaatgcgtcgctgaatgccggggcttcggtg
tttcagcaatggttcagcaatccggccagaacgctcggttctgcgctcgacctgccgttt
atcgaatggaacaaagtgcggctgaccgttgaacaatccggtctggatgtgcaaaccgcg
gcgattcagttccgcagcgcgtcctacagcgcgttgcaggatatcgacaatgccatgtcg
cagcgcctgacctatcagcaggaaaaacagcgacagctgcaagatctggcattaagtcag
cagcggctggcactggtggaaagccagtatcgccacggttcggtggtgtatcagacgctg
ctcgacgcgcagaacaccttgctggacagccagaacacgctggtcaccacgcaatataac
tacctgtattccacgatgaaactctggctggcgctggggggcggggaagacaacacattg
agtcaacaaggataa
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