Sphingomonas abietis: PBT88_07185
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Entry
PBT88_07185 CDS
T09690
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
sabi
Sphingomonas abietis
Pathway
sabi01501
beta-Lactam resistance
sabi01503
Cationic antimicrobial peptide (CAMP) resistance
sabi02020
Two-component system
sabi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PBT88_07185
09132 Signal transduction
02020 Two-component system
PBT88_07185
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBT88_07185
01503 Cationic antimicrobial peptide (CAMP) resistance
PBT88_07185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sabi02000
]
PBT88_07185
02044 Secretion system [BR:
sabi02044
]
PBT88_07185
01504 Antimicrobial resistance genes [BR:
sabi01504
]
PBT88_07185
Transporters [BR:
sabi02000
]
Other transporters
Pores ion channels [TC:
1
]
PBT88_07185
Secretion system [BR:
sabi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PBT88_07185
RTX toxin transporter
PBT88_07185
Multiple protein transporter
PBT88_07185
RaxAB-RaxC type I secretion system protein
PBT88_07185
Antimicrobial resistance genes [BR:
sabi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PBT88_07185
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PBT88_07185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WBO23885
LinkDB
All DBs
Position
complement(1491562..1492932)
Genome browser
AA seq
456 aa
AA seq
DB search
MDSVSHALSGAGHEVKAAEDTADALKALNRPVITASAQYLEYQKTLSLDLSGAKSDAASA
TDSFLSGLPSQFPPAFQQIVGEVAGRVEQALPGLLSAIPDTLRYQYRDDVFRPTVQAVMP
LYTGGAIPAIQHGALAGADIARAKQAQARELSTVNLVRVYFGQQVASQLLVSATDVRDAF
DRHLSDAQKLEQQGVIPHATTLQVQVARDAAERSRLRAELDARTASDELGRLLDADGGVT
PTTALFVDARPLPPVGDFLGGSDLPRAREADATRKLADAGTALAKSRFLPQAYAFGEYNF
DHKQALPIEPDWVVGVGVRYTLLSNIDRRKTLDAAREHARAAADAAADVRKTLTTETVRA
YDLVETARRSFLLLDSNIAAAQENLRVQQISFREGEASGAAVTDAIAALQTAETQRIATA
YEYDLALAGLLAASGRLDEFSDFLSRADHRLALPRP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttggatagtgtatcccacgcgctcagcggcgctgggcacgaggtcaaggcggcggaggat
accgcggatgcgctgaaggcgctcaaccgccccgtcatcaccgcctcggcgcaatatcta
gaatatcaaaagaccctctcgctcgatctgtcgggtgcaaaatccgatgcggcctcggcg
accgacagcttcctgagcggcctgccctcacaatttccgcctgccttccagcagatcgtc
ggcgaggttgccggccgcgtcgagcaagcgctgcccgggcttctctcagcgataccggac
acgctgcgctaccaatatcgtgatgacgtgtttcggccgacagtccaggccgtgatgccg
ctctacaccgggggcgccatcccggccatccagcatggcgcccttgctggagccgacatc
gcgcgagcaaaacaggcgcaagcgcgcgagctttcgaccgtaaatctcgtgcgcgtctat
ttcggtcagcaggtcgcgagccagttgctggtcagcgcaaccgatgtccgcgacgccttc
gatcggcatctctccgacgcgcagaagctcgaacagcagggagttatcccgcacgcgacc
acgcttcaggtccaggtggcgcgcgatgccgcggaacggtcgcgtctccgggccgaactc
gacgcacgcacggccagcgacgaactggggcgcctgctcgacgccgacggcggcgtcacg
ccgacgacggcgttgttcgtcgacgcccgcccgctcccgcctgttggcgacttccttggc
ggcagcgacctgccgcgcgcgcgagaggccgatgccactcgcaagctcgccgatgcgggc
accgcactcgccaaatcccgcttcctgccccaggcctatgctttcggcgaatataatttc
gaccataagcaggcgctcccgatcgaaccggactgggtcgttggtgtgggtgtccgctac
actcttctgtccaacatcgaccggcgcaagacactcgatgccgcacgtgagcatgcaagg
gccgcagccgacgcggcagccgatgtccgcaagacgctcacgacggagacagtccgcgcc
tatgatctggtcgagacggcgcggcgctccttcctgctgctcgacagcaatatcgcggcc
gcacaggagaatctgcgcgttcagcagatttcgttccgcgaaggcgaagccagcggtgct
gcggtgaccgacgcgatcgcggcgctgcagacggcggaaacccagcgcatcgcgaccgcc
tatgagtatgatctggcgctcgccggcctgctcgccgcaagcggtcgcctagatgaattt
tccgacttcctctcccgagccgaccatcgattggccttgccccgcccatga
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