Sphingomonas abietis: PBT88_09345
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Entry
PBT88_09345 CDS
T09690
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sabi
Sphingomonas abietis
Pathway
sabi01501
beta-Lactam resistance
sabi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBT88_09345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBT88_09345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sabi02000
]
PBT88_09345
01504 Antimicrobial resistance genes [BR:
sabi01504
]
PBT88_09345
Transporters [BR:
sabi02000
]
Other transporters
Pores ion channels [TC:
1
]
PBT88_09345
Antimicrobial resistance genes [BR:
sabi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PBT88_09345
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PBT88_09345
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PBT88_09345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF7432
YqaH
DUF3435
Motif
Other DBs
NCBI-ProteinID:
WBO24599
LinkDB
All DBs
Position
1923635..1924990
Genome browser
AA seq
451 aa
AA seq
DB search
MYRRPSPPVAPAFSSDTRAGVSIARIGWRDFFTDPDLQRLIETSLANNRDLRIAIGRVEE
ARAQYRIEGSQLYPTLDGVAGLTRSHTPADLSLIGQPVTASQYQSVLSVGWEVDLWGRLR
NMRASALQNFLATEEARRGVSTSLIAQLVSAWLQEHEYDERITLAERTIDSRRESFRIAN
RRYEVGSGSKLDMTQAETLLTQAQTTLQALHQARDENRNALTLLVGAPYDPGQRSLNLAG
TNADRALPAGLPSELLLNRPDILEAEHQLIAAHADVGAARADFFPNITLTGDFGTASAHL
TDLFAHGQRSWGFSPMVTLPIFNGGRNKANLDLAKARRNIAVANYERTIQAAFRDVADAL
AQRKWLAGQIATTRQTVDALDERLRLAQLRYTSGRSAYLEVLEAERDRFDTEQALVQLRR
AYYASGVSLYAAVGGGFPEDATQQAQGGQAG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgtaccggcgcccgtcacctcccgtggctccggcattctcgagcgatacccgcgccggc
gtctcgatcgcgcgtatcggatggcgggacttcttcaccgatcccgatctccagcgactg
atcgagacatcgctcgcaaacaaccgcgatctgcggatcgccataggacgggtcgaggaa
gcgcgggcgcaatatcggatcgagggatcgcaactctatccgacgctcgacggcgtggcg
ggcctgacgcgcagccatacgccggcggatctctccctgatcggccagccggtcacggcc
agccagtaccagtcggtgctgagtgtcggctgggaagtcgatttgtggggccggctgcgc
aacatgcgtgcgtccgcgcttcagaacttcctcgccaccgaggaggcgcgccgcggcgtc
tcgacgagcctcatcgcgcaactcgtctcggcatggctccaggaacatgaatatgacgag
cgcatcacgctcgccgagcgcacgatcgacagccgacgcgaaagcttccgcatcgccaac
cgccggtacgaggtcgggtcgggctcgaagctcgacatgacgcaggccgagacgctgctg
acccaggcgcagacgacgctccaggcgctccatcaggcgcgcgacgagaaccgcaacgcg
cttacgctgctggtcggcgcgccatacgaccccggccagcgatcgctgaacctcgcgggc
accaacgcagaccgtgcgctcccggcgggactgccttccgagctactgctcaaccgtccc
gacatcctcgaagcggagcatcagctgatcgcggcgcatgcggacgtcggcgcggcgcgc
gccgacttcttcccgaacatcacgctcaccggcgatttcggcaccgctagcgcgcatctg
accgacctgttcgcccacggccagcgaagctggggtttttcgccgatggtgacgctgccg
atcttcaacggcggccgcaacaaggccaatctcgatctcgccaaggcacggcgcaacatc
gccgtcgccaattacgagcggaccatccaggctgcgttccgcgatgtcgccgatgcgctg
gcgcagcgcaaatggctggccggccagatcgcgacgacacgccagacggtcgacgccctc
gacgagcggctgcggctcgcgcagcttcgctacaccagcggccgttccgcctatctcgag
gtgctcgaggccgagcgcgaccggttcgataccgagcaggcgttggtccagctccgccgc
gcttactatgcgagcggcgtcagcctctacgccgcggtcggcggcgggtttccggaagat
gcgacacagcaggcccagggcggacaggcaggatga
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