Shewanella aestuarii: HBH39_02880
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Entry
HBH39_02880 CDS
T06921
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
saes
Shewanella aestuarii
Pathway
saes01501
beta-Lactam resistance
saes01503
Cationic antimicrobial peptide (CAMP) resistance
saes02020
Two-component system
saes03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HBH39_02880 (tolC)
09132 Signal transduction
02020 Two-component system
HBH39_02880 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBH39_02880 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
HBH39_02880 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saes02000
]
HBH39_02880 (tolC)
02044 Secretion system [BR:
saes02044
]
HBH39_02880 (tolC)
01504 Antimicrobial resistance genes [BR:
saes01504
]
HBH39_02880 (tolC)
Transporters [BR:
saes02000
]
Other transporters
Pores ion channels [TC:
1
]
HBH39_02880 (tolC)
Secretion system [BR:
saes02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HBH39_02880 (tolC)
RTX toxin transporter
HBH39_02880 (tolC)
Multiple protein transporter
HBH39_02880 (tolC)
RaxAB-RaxC type I secretion system protein
HBH39_02880 (tolC)
Antimicrobial resistance genes [BR:
saes01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HBH39_02880 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HBH39_02880 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Cyt_bd_oxida_I
Viral_NABP
Motif
Other DBs
NCBI-ProteinID:
QIR13583
UniProt:
A0A6G9QHG1
LinkDB
All DBs
Position
PN3F2:complement(614622..615929)
Genome browser
AA seq
435 aa
AA seq
DB search
MKFKMGSLYAALSFAVVAPTVQADDLLQIYQQALTNDPIVLQAQAQRNALYEKIEENRAP
LLPTISGTVGYSKAWNDYEDAATVKPSGFTGGIQLQQVIYDHSAWVGLDLAELAASQADS
AYASALQALIIRVTQAYFNVLTAKDNYEFQGAEKAAIERQLEQTKQRFAVGLTAITDVHE
AQAQYDLASAQEILAENDLANSYEALREITGIDHKTLNVLDTNRFSATAPAPASSTDWLK
MAEVSSLDLLTQRIGKDIANETIKLYKAGHMPSLSLNAGYTKGFEQKPTADFDNSNIGVT
LKVPIFEGFKVSSQVKQAQYQYVEASERLEQTHRSVVKDVRNNYNNVAASISSIRAYEQS
VISSESALKATQAGFEVGTRTIVDVLNRTRDLYDSKRKLSDARYGYIKSIMALKQAAGTL
NEDDVIAINSGLIAE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaaaatgggttctttatacgcagcactgtcgtttgcagtcgttgcaccaaca
gttcaagctgatgatttattacaaatttatcaacaagcgctaactaatgatccaatcgta
ttacaagcgcaagcccagcgtaatgctttatacgagaaaattgaagaaaatcgcgcaccg
ttattaccaacaattagtggtactgttggctattcaaaagcgtggaatgattacgaagat
gccgcaaccgtaaaaccttcaggctttaccggcggtattcaacttcagcaagtcatttat
gatcatagcgcttgggttggtttagatttagcagagctagctgcatctcaagctgactct
gcttacgcttcagcattacaagccctaattattcgtgtaacccaagcatacttcaatgta
ttaacggctaaagataactatgagttccaaggcgctgaaaaagccgccattgagcgtcag
ttagagcaaactaagcagcgttttgctgtgggtttgaccgcaattaccgatgtacatgaa
gcgcaagcacaatacgatttagcctcagcgcaagaaatcttagctgaaaacgatctcgct
aatagctatgaagcacttcgtgaaattacgggaatcgatcataaaacattaaatgtgtta
gataccaaccgattttcggcaacagctcctgctccagcctcatctacagactggttaaaa
atggctgaagtgagcagtttagatctattgacacagcgaatcggcaaagacatcgctaac
gaaaccattaaattatataaagcgggccacatgccatctttatcgctaaacgcaggttac
accaaaggctttgagcaaaagccaactgcagactttgacaattcaaatattggcgtaacc
ctaaaggtacctatttttgaaggctttaaagtctcttcacaagttaaacaagctcaatac
caatatgttgaagcaagcgaaagacttgaacaaactcatcgcagcgtagttaaagatgtt
cgtaataactataacaacgttgcggcatctatcagttctattcgtgcttatgagcaatca
gtgatttcttctgaaagtgcattaaaagcaactcaagcaggctttgaagtgggtacacgt
actatcgttgatgtactaaaccgtacccgtgatttatatgattcaaagcgtaaattgtct
gatgcgcgttatggttatatcaagtctattatggccttaaaacaagctgccggtacattg
aatgaagatgatgttattgcaattaacagtggtttaatcgctgaataa
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