Silicimonas algicola: EF888_06245
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Entry
EF888_06245 CDS
T05779
Name
(GenBank) transporter
KO
K12340
outer membrane protein
Organism
salo
Silicimonas algicola
Pathway
salo01501
beta-Lactam resistance
salo01503
Cationic antimicrobial peptide (CAMP) resistance
salo02020
Two-component system
salo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EF888_06245
09132 Signal transduction
02020 Two-component system
EF888_06245
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EF888_06245
01503 Cationic antimicrobial peptide (CAMP) resistance
EF888_06245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salo02000
]
EF888_06245
02044 Secretion system [BR:
salo02044
]
EF888_06245
01504 Antimicrobial resistance genes [BR:
salo01504
]
EF888_06245
Transporters [BR:
salo02000
]
Other transporters
Pores ion channels [TC:
1
]
EF888_06245
Secretion system [BR:
salo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EF888_06245
RTX toxin transporter
EF888_06245
Multiple protein transporter
EF888_06245
RaxAB-RaxC type I secretion system protein
EF888_06245
Antimicrobial resistance genes [BR:
salo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
EF888_06245
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
EF888_06245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TPR_6
DUF6374
LppA
Motif
Other DBs
NCBI-ProteinID:
AZQ69600
LinkDB
All DBs
Position
1249217..1250569
Genome browser
AA seq
450 aa
AA seq
DB search
MNKLRTSIAAMVLSLAALPTTAETLTDALIDAYRDSGLIDQNRAVLRAADEDVAQAVATL
RPVLNYAAGVNYADPSTGSDVNATISLTAGMLLYDFGRSELGVDVAKETVLATRAVLVDV
ENTVLLNTVTAYLAVRRSEAFVDLRQNNVRLLTEQLRATRDRFDVGEVTRTDVSLAEARL
AAARSGLAAEQGGLAQAREQYRAVVGQYPDNLAPPPTPPAIPASEEAARAIARQENPQVI
QVRHQVKAADIAVERASRNRLPNIEVSGRFGIDDEGDDSTSLGVELSGPIYQGGALSSLK
RQSLARRDQVRAQLYTTGLLVDQQVGNAYANLAVAIASIDASDRQVRAAQLALEGVREEL
QLGARTTLEVLDQEQEVLDALTSRVAAEVDRYLAIYQVLDAMGRLTAERLGLNVPIYDPA
AYYNAVKDAPLHISPQGQRLDRVLRSIGRN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactccgcacatccatcgccgccatggtcctgtcgctggcggcgctgccgaca
acggcggaaacgctgacggacgcactcatcgacgcctatcgcgacagcgggctgatagac
cagaaccgcgccgtcctgcgtgccgcggacgaggatgtggcccaggccgttgcgaccctt
cggccggtcttgaactacgccgccggagtgaactacgccgatccttcgaccggcagtgac
gtcaacgcaacgatctcgctgacagcgggaatgctgctctacgatttcggtcgctcggaa
ctcggggtcgacgtggcgaaggaaaccgtactcgccacccgcgcggttctcgtcgatgtc
gaaaacacggttctgctgaacaccgtcaccgcctatcttgccgtgcgccggtccgaggct
ttcgtcgacctgcgccagaacaacgtccgcctcctgaccgaacagcttcgcgcaacccgc
gaccgcttcgatgtgggcgaggtgacgcgcaccgacgtctcgctcgccgaggctcgtctt
gccgcggcccggtccggtctcgcggccgagcagggcggcctcgcacaggcgcgcgagcag
tatcgcgccgtcgtcggccaatatcccgacaatcttgcgcctccgcccacgccgcccgcc
attccggcgagcgaagaggccgcgcgcgcgatcgcacgtcaggaaaaccctcaggtcatc
caggtccggcaccaggtcaaggcggcggatatcgccgtcgaacgcgcctcgcgcaaccgg
cttcccaacatcgaggtctcgggccggttcgggatcgacgacgaaggtgacgacagcacg
tccctcggggtcgagctctcggggccgatatatcagggtggcgcactgtcgtcgctgaag
cgccagtcgttggcgcgccgcgaccaggtgcgggcgcagctctacaccaccggtcttctt
gtcgaccagcaggtcggcaacgcctacgccaacctcgccgtcgccattgcatccatcgat
gcctccgaccgccaggtgcgcgccgcgcagctcgccctcgaaggcgtgcgcgaagagctt
cagcttggcgcgcggacgacgctcgaggtcctcgaccaggagcaggaggtgctcgacgcc
ctcaccagccgcgtcgcggccgaggtcgaccggtatctcgcgatctaccaggttctcgac
gcgatgggacggctcacggccgagcggctgggcctcaacgtcccgatctacgatccggcc
gcctactataacgccgtcaaggacgcgccactccacataagcccccaggggcagcgactg
gaccgggtcctgagatccattggtcgcaactga
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