Sphingobium amiense: SAMIE_1000620
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Entry
SAMIE_1000620 CDS
T06684
Name
(GenBank) phytoene desaturase
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
sami
Sphingobium amiense
Pathway
sami00906
Carotenoid biosynthesis
sami01100
Metabolic pathways
sami01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SAMIE_1000620
Enzymes [BR:
sami01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
SAMIE_1000620
1.3.99.28 phytoene desaturase (neurosporene-forming)
SAMIE_1000620
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
SAMIE_1000620
1.3.99.31 phytoene desaturase (lycopene-forming)
SAMIE_1000620
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
Pyr_redox
Pyr_redox_2
Lycopene_cycl
FAD_binding_3
HI0933_like
FAD_oxidored
DUF2110
Pyr_redox_3
NAD_binding_9
GIDA
Motif
Other DBs
NCBI-ProteinID:
BBD96561
UniProt:
A0A494VXL0
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All DBs
Position
63298..64785
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AA seq
495 aa
AA seq
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MSRTAIVIGAGFGGLALAIRLQSAGVQTTLVEARDRPGGRAYVWEKDGFTFDAGPTVVTD
PDCLSELWRLSGHDMAQDVTLMPVMPFYRLNWRDGTNFDYSNDEAQLRAEIARLDPNDVT
GYERFLDYSAGVFEEGYRKLGSAAFLDFASMIKAAPALAKYQAWRSVYSMVASFVKNEKL
REALSFHTLLVGGNPMKTSSIYALIHKLEKDGGVWFAKGGTNRLVQGMATHFERLGGVMR
LGDPVTRIETYGDRATGVHTASGWRAEADAVATNGDLMHSYRDLLAHHPRGQKQGEKLAR
KRWSPSLFVLHFGIKGSWPGIPHHMILFGPRYEGLLTDIYDHGVLPQDFSLYLHHPTVTD
PSMAPEGHSTFYALAPVPHMGKLPIDWEQFAPAYAERILDEIQHRLIPDIRSRIVTQFHY
TPRDFGRDLAAHMGSAFSLEPLLTQSAFFRAHNRDDVIPNLYLVGAGTHPGAGIPGVVGS
AKATAALMLDDLGRM
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaccgccatcgtcatcggcgcgggcttcggcgggctggcgctggccatccgc
ctccagtccgcaggcgtccagaccacgctggtcgaggcgcgcgaccggcccggcgggcgc
gcctatgtgtgggagaaggacggtttcaccttcgacgccggtcccacggtcgtcaccgat
cccgactgcctgtcggagctgtggcggctgtcggggcacgacatggcgcaggacgtgacg
ctgatgccggtcatgcccttttatcgcctcaactggcgggacggcaccaatttcgattat
tccaacgacgaagcgcaactgcgcgccgagatcgcccggctcgatcccaacgatgtgacc
ggctacgagcgcttcctcgattattcggcgggcgtgttcgaggaaggttatcgcaagctc
ggttcggcggcgttcctcgacttcgcctcgatgatcaaggccgcgcccgcgctcgccaaa
tatcaggcgtggcggtcggtctattcgatggtcgcgtccttcgtgaagaacgagaaactg
cgcgaggcgctgtcgttccacacgctgctggtcggcggcaatccgatgaagaccagttcg
atctacgccctcattcacaagctggagaaggacggcggcgtctggttcgcgaagggcggc
accaaccggctggtgcagggcatggccacgcatttcgagcggctgggcggcgtcatgcgg
ctgggcgatccggtgacgcggatcgaaacctatggcgaccgggcgacgggggtccacacc
gcgtcgggctggcgcgcggaggccgatgcggtcgcgaccaacggcgacctgatgcacagc
tatcgcgacctgctggcgcaccatccgcgcgggcagaagcagggcgagaaactggcgcgc
aagcgctggtcgcccagcctcttcgtcctgcatttcggtatcaaggggagctggccgggc
atcccgcaccacatgatcctgtttgggccgcgatatgaagggctgctgaccgacatttac
gatcatggcgtgttgccgcaggatttctcgctctacctgcatcacccgaccgtcaccgat
ccgtcgatggcaccggaggggcattcgactttctacgcgctggcaccggtgccgcatatg
ggcaagctgccgatcgactgggaacagttcgcgcccgcctatgccgaacgcattctggac
gaaatccagcaccgcctgatccccgacatccgatcgcgcatcgtgacgcagtttcattat
accccgcgcgatttcgggcgcgatctggcggcgcatatgggcagcgccttcagcctggag
ccgctgctgacgcaaagcgctttcttccgtgcgcataatcgcgacgatgtgatccccaac
ctctatctggtaggggccggcacccatccgggcgcgggcatccccggcgtggtgggcagc
gccaaggcgaccgcggcgttgatgctggacgaccttggcaggatgtag
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