Sphingobium amiense: SAMIE_1008080
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Entry
SAMIE_1008080 CDS
T06684
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sami
Sphingobium amiense
Pathway
sami01501
beta-Lactam resistance
sami01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMIE_1008080
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMIE_1008080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sami03036
]
SAMIE_1008080
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sami02000
]
SAMIE_1008080
01504 Antimicrobial resistance genes [BR:
sami01504
]
SAMIE_1008080
Chromosome and associated proteins [BR:
sami03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SAMIE_1008080
Transporters [BR:
sami02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SAMIE_1008080
Antimicrobial resistance genes [BR:
sami01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SAMIE_1008080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
BMFP
Motif
Other DBs
NCBI-ProteinID:
BBD97307
UniProt:
A0A494W3Z3
LinkDB
All DBs
Position
956243..957322
Genome browser
AA seq
359 aa
AA seq
DB search
MVTLKSETAPLFNELPGRIVAVETAEVRPQINGIIRRRLFEEGGYVRAGQLLYEIDDAPY
RAALAQAQGQLARANAAIRATGLQAQRYRDLVGINAVSRQEYDDAAAAAEQARADVAAQR
GAVQAAQVNQNFTRVRAPISGRISRSLFTPGALVQAGQADALTTIQRTDTVYVDVTQSAA
QIIDLRQAMKSGGISEAGGARIQLLLPNGSVYPVEGRLQFTEVTVDQASGAVTLRASFPN
PDGLLLPGMYVRARLIEGQRLQAILAPQQGISRDPRGRATAMVVGKDNKVEMRQVEVDRT
LGDKWIVTRGLKSGDRLIVEGLLNLRPGTVVRPGAPQQVTAGAPGGAGGKAESAPGGAN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtggtcacgctcaagagcgagactgcgccgcttttcaacgaacttcccggccggatcgtc
gcggtcgaaacagccgaggtgcgtccccagatcaatggcatcatccgccgcaggcttttt
gaggaaggcggctatgtccgggccgggcaacttctgtatgagatcgacgacgcgccgtat
cgcgccgctctggcgcaggcgcagggacagttggcccgcgccaacgcggcgatccgggcg
accggtcttcaggcgcagcgctacagggatctggtcggtatcaacgccgtcagccgtcag
gaatatgacgatgccgccgccgccgccgagcaggcgcgcgccgatgtcgcagcccagcgc
ggcgccgttcaggccgcgcaggtcaaccagaacttcacgcgggtgcgcgcgcccatttcg
ggtcggatcagccgctcgctcttcacgcccggtgcgctcgtgcaggcggggcaggccgac
gcgctgacgacgatccagcgcaccgataccgtttatgtcgacgtcacccagtccgccgca
cagatcatcgacctccggcaggcgatgaagagcggcggcatcagcgaagcgggcggcgcg
cgcatccagttgctgctgcccaatggcagcgtctatcccgtcgaaggccgcctccagttc
accgaagtcacggtagatcaggcgtcgggcgcggtgacgttacgcgccagtttccccaat
cccgacggtcttctgctgcccggcatgtatgtgcgcgcacgtttgatcgaagggcagcgg
ttgcaggcgatcctcgctccgcagcagggcatcagccgcgacccgcgtggccgcgctacg
gcgatggtcgtcggcaaggacaacaaggtcgagatgcgtcaggtcgaggtcgatcgcacg
ctgggcgacaagtggatcgtgaccagagggcttaagtccggggatcgcctgatcgtcgag
gggcttttgaacctgcggcccggaacggtcgtgcgacccggcgcgccgcaacaggtgacg
gcaggcgcgccgggcggggcagggggcaaggcagagtccgcgccgggcggggccaactag
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