Sphingobium amiense: SAMIE_1020020
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Entry
SAMIE_1020020 CDS
T06684
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sami
Sphingobium amiense
Pathway
sami00300
Lysine biosynthesis
sami00550
Peptidoglycan biosynthesis
sami01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMIE_1020020
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMIE_1020020
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sami01011
]
SAMIE_1020020
Enzymes [BR:
sami01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
SAMIE_1020020
Peptidoglycan biosynthesis and degradation proteins [BR:
sami01011
]
Precursor biosynthesis
Amino acid ligase
SAMIE_1020020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BBD98501
UniProt:
A0A494W2S8
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All DBs
Position
complement(2344096..2345544)
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AA seq
482 aa
AA seq
DB search
MRLGSLVEGLGADAGGNADAPVTGFAIDNRKVAPGTVFGAFQGLRVNGEDFIADAVKAGA
VAVVARPEAKVEGAAHIADPNPRRLFAQMAARFFAPFPDVTVAVTGTNGKTSTVELARQI
WRMLGHKSASIGTLGVTTSVDQVSTGLTTPDIVTFLANMSGLKREGITHAAFEASSHGLD
QYRTEGLPVMAGAFTNLSRDHLDYHGDMDSYFDAKMRLFDEVVNADGHAVIWADDEWSGK
AIQRARKRGLRVLSVGVQGQGLRLANRTPTQLGQTLEIEAAQELGGQAYKINLPLIGAYQ
AANALTAAGLVIATGGETAKVLELLARVQPVRGRLERAVITRAGAPVYVDYAHTPDGLRA
AIEALRPHTRGRLITLFGAGGDRDAGKRPQMGKVAADLSDHVIVTDDNPRSEEPSAIRAA
VMAGAPGAEEIGGRRPAIAAAIAQAGADDIVLLAGKGHEQGQIIGDRVLPFDDVTVAREC
AG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgggatcgcttgtcgaagggctgggtgcggacgcgggcgggaacgccgacgcg
cccgtcaccggcttcgccatcgacaatcgcaaggtcgcgcccggcaccgtcttcggcgca
tttcagggtctgcgcgtcaatggcgaggatttcatcgctgacgccgtgaaggcgggcgcg
gtcgcggtcgtcgcgcggcctgaagcgaaagtggagggcgcggcgcatatcgccgacccc
aatccccgccgcctctttgcgcagatggccgcgcgcttcttcgcgcccttccccgacgtg
accgtcgccgtcaccggcaccaacggcaagaccagcaccgtcgaactggcgcgccagatc
tggcggatgctggggcacaagtcggcctccatcggcacgctgggcgtcaccacttcggtc
gatcaggtgtcgacgggtctcaccacgccggacatcgtcaccttcctcgccaacatgtcg
ggcctgaagcgcgagggcatcacccatgccgcgttcgaagcgtcgagccacggtctcgac
cagtatcgcaccgaagggctgcccgttatggcgggcgctttcaccaacctgtcgcgcgac
catctcgactatcatggcgatatggacagctatttcgacgccaagatgcggctgttcgac
gaggtggtgaatgcagatggccacgcggtcatctgggcggacgacgaatggtccggcaag
gcgatccagcgcgcacgcaagcgggggcttcgtgtgctgagcgtcggggtgcaggggcag
ggcttgcgccttgccaaccgcaccccgacccagttgggtcagacgctggagatcgaggcg
gcccaggaacttggaggccaggcctataagatcaacctgccgctgatcggcgcctaccag
gcggcgaatgcgctgacggcggcgggcctcgtcatcgcgaccggcggggagaccgcgaag
gtgctggagctgctcgcccgcgtgcaaccggtgcgcggacggctggagcgcgccgtcatc
acccgcgcgggcgcgccggtctatgtcgattacgcccatacgcccgacggtctgcgcgcc
gcgatcgaggcgctgcggccccatacgcgcgggcggctcatcaccctgttcggcgcgggc
ggggatcgcgacgcgggcaagcgcccgcagatgggcaaggtcgccgccgacctgtccgac
catgtcatcgtgaccgacgacaatccgcgttcggaagagccttccgccatccgcgccgcc
gtgatggcgggcgcacccggagcggaggagattggcggccgccgccccgctattgctgcc
gccatagcgcaggcgggggcggacgacatcgtgctgctggcggggaaggggcatgaacag
ggccagatcatcggcgatcgggtgctgcccttcgacgatgtgaccgttgcgcgggagtgc
gcggggtga
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