Caldimonas aquatica: OMP39_05615
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Entry
OMP39_05615 CDS
T08587
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
saqa
Caldimonas aquatica
Pathway
saqa01501
beta-Lactam resistance
saqa01503
Cationic antimicrobial peptide (CAMP) resistance
saqa02020
Two-component system
saqa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OMP39_05615
09132 Signal transduction
02020 Two-component system
OMP39_05615
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OMP39_05615
01503 Cationic antimicrobial peptide (CAMP) resistance
OMP39_05615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saqa02000
]
OMP39_05615
02044 Secretion system [BR:
saqa02044
]
OMP39_05615
01504 Antimicrobial resistance genes [BR:
saqa01504
]
OMP39_05615
Transporters [BR:
saqa02000
]
Other transporters
Pores ion channels [TC:
1
]
OMP39_05615
Secretion system [BR:
saqa02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OMP39_05615
RTX toxin transporter
OMP39_05615
Multiple protein transporter
OMP39_05615
RaxAB-RaxC type I secretion system protein
OMP39_05615
Antimicrobial resistance genes [BR:
saqa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OMP39_05615
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OMP39_05615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UZD56055
LinkDB
All DBs
Position
complement(1236821..1238272)
Genome browser
AA seq
483 aa
AA seq
DB search
MAERIPLAPSTDASRDAPRASRLAASGPDAPAWAATLSALWGRASRRLVGGLAAGCVLLW
TAGHAQAQTLMEVYEAARSYDATYLAARAQAESVRFATEQAYALRRPSVGLSAAVTRSEL
DPPVGSDRTTTNRQVGVSAAQPIFNRANSVRIEQAERSLEIAKADLQAAEQDLIVRVAQA
YFNVLAAQDALGTARANKKAIEEQLASAKRNFEVGTATITDTREAQARYDLAVAQEIAAE
NQLRTAQVALDQLVGRTGVIPRPLTAPVTLPPIHPESVDVWVSRAETSPTVRRAQLGLEI
ASLETERARAGHLPTVDLVGDVGRSRQTSDPPSMTQPSGTYGSATVGVQLKMPLFAGFSV
QNRIRETLLLEEKARNDLAAARRGTDQATRQAFLALQSGLAQVRALEAAEASSRLALEAT
LTGYRVGVRVNLDVLNAQTQLFTTQRDLARARYDALLGRLRLEQAAGQLDPADLQQINAL
LAP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcggattccccttgcgccctcgaccgacgcttcgcgtgacgccccccgtgcc
tcgcgccttgccgcatccggccctgatgcgccggcatgggcggccacgctgtccgccctt
tgggggcgggcttctcgtcggctcgtcgggggcttggcggccggctgcgtcttgctgtgg
acggcggggcacgcgcaggcgcagacgctgatggaggtgtacgaggccgcccgcagctac
gacgccacctacctcgctgcacgtgcgcaggccgagtcggtgcgcttcgccaccgagcag
gcctacgcgctgcgccgccccagcgtgggcctgagcgcggccgtcacccgcagcgagctc
gacccgccggtcggcagcgaccgcaccacgacgaaccgacaggtgggcgtctccgccgcg
cagccgatcttcaaccgcgccaacagcgtgcgcatcgagcaggccgagcgttcgctcgag
atcgccaaggccgacctgcaagcggccgagcaggacttgatcgtgcgcgtggcgcaagcc
tacttcaacgtgctggccgctcaggatgcgctgggcacggcgcgcgccaacaagaaggcc
atcgaggagcagctcgcctcggccaagcgcaacttcgaggtgggcaccgccaccatcacc
gacacccgggaagcgcaggcgcggtacgacctcgccgtggcccaggagatcgccgccgag
aaccagctgcgcaccgcgcaggtggcgctcgatcaactggtcggccgcacgggggtgatt
ccccggccgctcaccgcccctgtcacgctgcccccgatccaccccgagtcggtcgacgtc
tgggtgagccgcgcggaaacctcgcccacggtgcgccgggcgcaactcgggctcgagatc
gcctcgctcgagacggagcgcgcgcgcgccggacacctgcccaccgtcgatctggtcggc
gacgtgggccgcagccgacagacgagcgatccgcccagcatgacgcagccctccggcacc
tatggcagcgcgaccgtcggcgtgcaactcaagatgccgctgttcgccggcttctcggtg
cagaaccgcatccgcgagaccctgctcctcgaagagaaggcccgcaacgacctggccgcg
gcccggcgcggcacggaccaggcaacgcgccaggccttcctcgcgctgcaatccggtctg
gctcaggttcgcgccctcgaagcagccgaggcgtccagccgtctggcgctggaggccacg
ctcacgggctaccgggtcggcgtgcgggtgaacctcgacgtgctcaacgcccaaacccaa
ttgttcacgacccagcgcgacctcgcccgcgcacgctacgacgcgctgctcggccggctg
cgactggagcaggcggccggccaactcgacccggccgacctgcagcagatcaacgccctg
ctcgctccctga
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