Stenotrophomonas aracearum: PDM28_06585
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Entry
PDM28_06585 CDS
T10111
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sarc Stenotrophomonas aracearum
Pathway
sarc01501
beta-Lactam resistance
sarc02024
Quorum sensing
Module
sarc_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
sarc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDM28_06585
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDM28_06585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sarc02000
]
PDM28_06585
01504 Antimicrobial resistance genes [BR:
sarc01504
]
PDM28_06585
Transporters [BR:
sarc02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM28_06585
Antimicrobial resistance genes [BR:
sarc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDM28_06585
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PDM28_06585
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PDM28_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SegE_GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
WNH49967
LinkDB
All DBs
Position
complement(1428644..1430080)
Genome browser
AA seq
478 aa
AA seq
DB search
MKMASLFKSIPALRPLALACTTAVMLSACVSTGQYKVNAPSVPAVYGRGDAQLNAPATVS
NPAPTLQADVRDDAWWTGFGDPRLDRVIDRALQANTDLASAGLAVQRARLQAGLSENALW
PQPSGSVSSNGNRAIDQNADWNRSSSAGVSLQWEIDLWGRLRAQRDIAQWEAQASEEDLQ
NTALLVISDVATQYWTLAYLNQSISAGQANLDRLQRTQELVQARFDAGAVSRLEVRQATQ
QLEAQRAAQSALEQQRVASRNALTVLLDGQPWPQADEPQVLDIAATPVIAEGLPADLLGR
RPDLRAAELRLRNSLKNIKVTATSYYPALSLTGGVGTGGTTLSDVLKNPVASLGAGLSLP
FLNIRQAQLDTKIAGTDYQIAANTFRRTLYTALSEVDNALSARTQFATQVAASQASYDEA
VEIERMYEVRYRVGATDLRTWLEAQQTRRDAELSLAAVKQKLLVNDVTLFKALGGSAG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcatccctgttcaagtctattcctgccctgcgcccactggcgctggcctgc
accactgccgtgatgctgtcggcctgcgtcagcaccgggcagtacaaggtaaacgctccc
agcgtgccggccgtctatggtcgtggcgatgcgcagctcaatgcaccggccacggtgtcg
aacccagcgccgacgttgcaggccgacgtacgcgatgatgcatggtggaccggcttcggc
gacccgcgcctggaccgggtgatcgaccgggcgctgcaggccaacaccgacctggcctcg
gcgggcttggcggtgcagcgtgcgcgcctgcaggccgggctatccgagaacgcattgtgg
ccgcagccttcgggcagcgtcagcagcaatggcaaccgcgccatcgaccagaacgcggac
tggaatcgcagcagttcggcaggcgtgtcgctgcagtgggagatcgacctgtgggggcgc
ctgcgcgcgcagcgcgacatcgcccagtgggaggcgcaggccagcgaagaggacctgcag
aacaccgcgctgctggtgatcagcgacgtggccacccagtactggacgctggcctacctc
aaccagtcgatcagcgccggccaggccaacctggatcggctgcagcgcacgcaggagctg
gtccaggcgcgcttcgacgccggcgcggtgtcgcgactggaagtgcgccaggcgacccag
cagctggaggcgcagcgggccgcgcagagcgcgctggagcagcagcgcgtggccagccgc
aatgcgctgaccgtgctgctggacgggcagccgtggccgcaggccgacgaaccgcaggtg
ctggacatcgcggccacgccggtgattgccgagggattgccggccgacctgctcggccgt
cgcccggacctgcgcgcggccgagctgcggctgcgcaacagcctgaagaacatcaaggtg
accgcgaccagctattacccggcgctgagtttgaccggtggggtcggcacgggagggacc
acgttgtcggacgtgttgaagaacccggtggcgtcactgggcgcgggattgtcgctgccg
ttcctgaacatccgacaggcgcagctggatacgaagattgccggcaccgactaccagatc
gcggcgaacaccttccggcgcacgttgtacacggcgctgtctgaagtggacaacgcgctg
tcggcgcgcacccagttcgccacgcaggtggcggcgtcacaggcgtcgtatgacgaagcg
gtggaaatcgagcggatgtacgaggtccgttaccgggtgggcgccacggatctgcgcacc
tggctggaagcgcagcagacgcgtcgcgacgcggagttgtcgctggctgcggtgaagcag
aagctgctggtgaacgatgtgacgttgttcaaggcgttggggggaagcgcggggtga
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