Candidatus Sarcina troglodytae: HH195_05570
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Entry
HH195_05570 CDS
T06935
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
sarj
Candidatus Sarcina troglodytae
Pathway
sarj00680
Methane metabolism
sarj00720
Other carbon fixation pathways
sarj01100
Metabolic pathways
sarj01120
Microbial metabolism in diverse environments
sarj01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
HH195_05570 (fdhF)
00680 Methane metabolism
HH195_05570 (fdhF)
Enzymes [BR:
sarj01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
HH195_05570 (fdhF)
1.17.98.5 hydrogen-dependent carbon dioxide reductase
HH195_05570 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
SIS
DNA_pol_A
ARL2_Bind_BART
Motif
Other DBs
NCBI-ProteinID:
QPJ85414
LinkDB
All DBs
Position
complement(1247187..1249331)
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AA seq
714 aa
AA seq
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MRTKVLETCPYCASGCQLYLIVEDGKVIKAEPADGRTNEKTLCLKGHYGWDYLNDPQILT
RRLQSPMIRKNGVLEPVSWEEAIKYVADNLSAIKEKYGPDSIMMTGCARGSGNEANYIMQ
KFARATIGTNNIDHCARVCHGPTLPGLVYCLGDGAMSNSIEEIENTDLIFVFGYNGADSH
PIVARRIAKAKEKGAKIIVVDPRQTETSKFADLQLYIKGATNMALVNAFAHVLIEEKLYK
EDYVKNFTEGFEEYKKMVEKYTPEYAEAITGIKADEIRQAIREYAKAKNATILYGMGVCQ
FSQAVDVVRGLASLGLLTGNYGRANVGIGPVRGQNNVQGACDMGALPSYLPGYQKFTDKK
IREKFEKAWGVKIPTEKGESLTEVPKLVLKDKKLKAYYIMGEDPVQSDPNAAEVREALDE
LEFVIVQDIFMNKTALHADVILPATAWGEHDGVYTSADRGFQRIRKAVEAKGDVKTDWEI
ICEISTAMGYKMAYKNTEEIWNELIDLCPTFTGATYEKMEKLGGVQWPCTDKSDADKGTS
YLYKDNKFTTPSGKGVLFACEWRKPGEEVDDEYPLSLSTVREVGHYSVRTMTGNCRALRA
LEDEPGRIQMSIEDTKELGVKDGELVRVTSRRGSVITRASVSERIRKGSTFMTYQWWVGA
CNELTNDALDPISKTPEFKYCAVKVEKMENQEEAEKEVEKEYNEIRRKMGIKIR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaaagtgttagaaacatgtccatactgtgctagtggatgtcaattatatcta
atagttgaagatggaaaagtaataaaagcagaaccagcagatggtagaacaaatgaaaaa
acattatgtcttaaaggacattatggatgggattacttaaatgatcctcaaatattaaca
aggagattacaatctccaatgataagaaaaaatggtgtattagaaccagtatcttgggaa
gaagctataaaatatgtagctgataatctttcagctataaaggaaaagtatggacctgat
tcaattatgatgacaggatgtgcaagaggctcagggaatgaagccaattatataatgcaa
aaatttgcaagagcaacaattggaactaataatatagaccactgtgcaagagtgtgccat
ggtcctacattaccaggtcttgtttattgtttaggtgatggtgcgatgtcaaactcaata
gaagaaatagaaaatactgatttaatatttgtttttggatataatggtgcagatagtcat
ccaatagttgcaagaagaatagctaaagctaaagaaaaaggagctaaaataatagtagtt
gatccaagacaaactgaaacttcaaagtttgcggatcttcaattatatataaagggtgca
actaacatggctcttgttaatgcatttgcacatgttttaatagaagaaaaattatataaa
gaagattatgttaaaaactttacagaaggatttgaagaatataagaaaatggtagaaaag
tatactccagagtatgctgaagctataacaggaattaaggcggatgaaataagacaagct
ataagagaatatgcaaaagctaagaatgctacaattctttatggaatgggtgtttgtcaa
ttctcacaagcagttgatgttgtacgtggattagcttctttaggtcttttaacaggaaat
tatggtagagcaaatgttggtataggacctgttcgtggtcaaaataatgttcaaggtgct
tgcgatatgggagcacttccaagctatcttccaggttatcaaaaatttactgataaaaag
ataagagaaaaattcgaaaaagcttggggagtaaaaattccaactgaaaagggtgaatcc
ttaactgaagtaccaaaacttgttttaaaggataaaaagctaaaggcttattacataatg
ggtgaagatccagtacaaagtgatccaaatgctgcagaagttagagaagctttagatgaa
ttagagtttgttatagttcaagatatatttatgaataaaacagctcttcatgcagatgtt
atattacctgcaacagcttggggagaacatgatggtgtgtacacatcagctgatagagga
ttccaaagaataagaaaagctgtagaggcaaaaggtgatgtaaaaactgattgggaaatt
atctgtgaaatatcaactgctatgggatataaaatggcttacaaaaatacagaagaaatc
tggaatgaacttatagatctttgtcctacattcactggtgcaacttatgaaaagatggag
aaattaggaggagttcaatggccttgtacagataaatcagatgctgacaaaggaacttca
tatctttataaggataataagttcacaactccaagtggaaaaggtgtattatttgcatgt
gagtggagaaaaccaggtgaggaagtagatgatgaatatcctcttagcctttcaactgta
agagaagttggacattattcagttagaacaatgactggtaattgtagagcattaagagct
ttagaggatgaaccaggacgtatacaaatgagtatagaagatactaaagaacttggagta
aaagatggagaattagttagagtaacatctagaagaggttcagttataactagagcatca
gtttcagagagaataagaaagggctcaacatttatgacatatcaatggtgggttggagct
tgtaatgaattaacaaatgatgcattagatccaatttctaaaacaccagaatttaagtat
tgtgctgtaaaagtagaaaaaatggaaaatcaagaagaagccgaaaaagaagtagaaaaa
gaatataacgaaataagaagaaaaatgggaataaaaataagataa
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