Syntrophus aciditrophicus: SYN_00239
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Entry
SYN_00239 CDS
T00346
Name
(GenBank) type I secretion outer membrane protein
KO
K12340
outer membrane protein
Organism
sat
Syntrophus aciditrophicus
Pathway
sat01501
beta-Lactam resistance
sat01503
Cationic antimicrobial peptide (CAMP) resistance
sat02020
Two-component system
sat03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SYN_00239
09132 Signal transduction
02020 Two-component system
SYN_00239
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SYN_00239
01503 Cationic antimicrobial peptide (CAMP) resistance
SYN_00239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sat02000
]
SYN_00239
02044 Secretion system [BR:
sat02044
]
SYN_00239
01504 Antimicrobial resistance genes [BR:
sat01504
]
SYN_00239
Transporters [BR:
sat02000
]
Other transporters
Pores ion channels [TC:
1
]
SYN_00239
Secretion system [BR:
sat02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SYN_00239
RTX toxin transporter
SYN_00239
Multiple protein transporter
SYN_00239
RaxAB-RaxC type I secretion system protein
SYN_00239
Antimicrobial resistance genes [BR:
sat01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SYN_00239
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SYN_00239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
NucS_C
Motif
Other DBs
NCBI-ProteinID:
ABC78714
UniProt:
Q2LXA8
LinkDB
All DBs
Position
2855796..2857244
Genome browser
AA seq
482 aa
AA seq
DB search
MATPHGQDCITINKTILESCMQSLFWRDKYWKKISIVLMFLILMLLTCSSVLAESGQWQN
AGDVRIFTLSDIIHHAMINSPTIKQAESNVAVEQANLKAAKSERFPKIELGGGGARYHYP
TPVTPISGSPLAGVPFPEFSETIYDVGAFLHLPLYKGGRLVRNVELSELRGAAAADLLVA
KRQDLIYNLTSVYYKILQLNSFMQSTEAQVRGLETHQRQVEDFFKAGKVAQVELLKAQVE
VAKARENFLLAENSLKTTYELLRMLMGMEDPGQEFRIAGEPGYRKIDYSLEQALAEALKR
RPEYLSVLKTMQAGEERVEIAKARRLPYVYLAGQYVETTGTSVDLKENWNAALRLSLPLF
DGGLITAEIDREKAELEKVKQNERFLRLEINQEVKETFLSLENAEKRMEVASKAMESAKE
NLRVEELKYRKGASTTTNVVDAQTNLVLVETGYYQALYDRDIAIAGVRRAVGEDLSGEEQ
SK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccccacgggcaggactgtattacgatcaataaaacgatcctggagagctgt
atgcaatctttattttggagagataagtattggaaaaagatctcaattgttctcatgttt
cttattcttatgctcctgacctgcagcagcgtcctggcagagtcggggcaatggcaaaac
gcaggtgatgtcaggatttttactctttccgatattatccaccacgcaatgattaacagt
ccgaccattaaacaggcagaaagcaatgtggccgtggaacaggctaacttaaaggctgca
aaatccgagagatttccgaaaatcgagttgggcggggggggcgcccggtatcactacccc
actcccgttacaccgataagcggctcacctctggcgggagtgccatttcccgaattcagt
gagaccatttacgatgtcggtgcttttcttcacctacccctctataaaggtgggagactg
gttcgcaatgtagaactgtcagaattgcgaggggctgctgccgccgatctgctggtggcc
aaacgccaggatcttatctacaacctcacgagtgtttactataagattctccaactcaac
tcctttatgcaatcgacagaagcacaggtcaggggattggagacgcatcagcgccaggtt
gaggattttttcaaggcgggaaaggtggcgcaggtggagctcttgaaagcgcaagtcgag
gtggcaaaagccagggaaaacttcctcttggcggaaaacagcctgaagacgacttacgag
ctattgcgaatgctcatggggatggaagatccgggacaggagtttcggatcgccggagag
ccaggttacaggaagatcgattactcgttggaacaggccctcgctgaggcgttgaagaga
agaccggagtatctgtccgtgttgaagacaatgcaggccggagaggagcgcgttgaaata
gcgaaagcccggaggcttccctacgtatacctggctggccagtacgttgagacgacgggc
acctctgtcgaccttaaagaaaactggaacgccgcactgcggctttctcttcctcttttt
gacggaggcctcatcaccgccgaaatcgaccgcgagaaggctgaactcgaaaaagtgaaa
cagaacgagcgattcctgcgactcgagatcaaccaggaggtcaaagagacgttcttgagt
ctcgaaaacgctgaaaaacgcatggaagtagcctcgaaggcgatggaatcggcaaaggaa
aatctgcgagttgaggaactgaagtacagaaagggtgccagtaccaccaccaatgtggtt
gacgcccagacgaatctcgtactggtcgagacgggatattaccaagccctttatgaccgg
gatattgcaattgccggagtgcgcagggcggtcggagaagacctttccggggaggaacag
tcgaaatga
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