Sylvia atricapilla (blackcap): 136360240
Help
Entry
136360240 CDS
T10263
Symbol
PTCD3
Name
(RefSeq) small ribosomal subunit protein mS39
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sati03029
]
136360240 (PTCD3)
Mitochondrial biogenesis [BR:
sati03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
136360240 (PTCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
136360240
NCBI-ProteinID:
XP_066173416
LinkDB
All DBs
Position
4:complement(25859424..25875786)
Genome browser
AA seq
684 aa
AA seq
DB search
MAARRVGAGCWQRALWLGRRCRLPGGRESYRSSSSSTALGKTVDNSQVTQEEIVLPRRKT
WDKLAVLQTLASTVNRDPTAAHYMFQDDPFLMPRNAVNSRLYSLSKESGRNAAKYIIKNF
PQYFDKTFAEPNIPCLMPEALTPQTEGLSEEALRERIHLRMVKESVDMFDQLLQAGTPVS
LETTNSLLDLLCFYGGGEPRPEKEQEEKEGLEEPEVNASEQKAPKKRFQRSSQSSGPKWR
ENNHAERIFKIMPERNAHSYCTMIRGMVKHEAYSKAYDTYIDLLNERHKADVHTFNALIR
AVPYLKDRFTERWELAKDFLTQMAQQKVQPTLLTFNSVLKSLRRCGGVGRTMSLLVLKEM
EALDIEPSLASYDHLLSVYYKGVDAPSSDIISEVLNEVEKRSFTAQDPDDASFFTTAMQV
CCDLKDINLAYQVNKALEKGDNWKFLDVDRLNIYWSKFFSLLCMMEQIEVVLKWYKEMSS
SLFYPTPKNILDLLQALDAANQLEVIPSVWEDVKQLGFGRRQDLLEEFLSLMSRDQHPSE
IQLAFAKCAEEIKAVHEPAGQVQVPLEWTGSALGNVVVLFARAGRTQDAWKMMECFQKTN
RIPTDKVMDEFLNCAKQTNCPDEAIKMVKLAASLGLLSSQRLKSRTEEEFELSETQKKAL
ESIKWDGDSSDSDSDSDSSDSDRE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggcgggtcggggccggctgctggcagcgggcgctgtggctgggccggcgg
tgccgcctcccgggcgggcgggagagctaccggagctcttcaagtagtactgctcttggg
aagactgtggacaattctcaagtaactcaagaagaaattgtgctcccccgaaggaaaaca
tgggataagcttgcagtgctccagaccttggcttctactgtgaacagggatcctactgct
gctcattacatgttccaggatgaccctttcttgatgccaagaaatgcagttaattctcgt
ctgtattcattgtcaaaggagtctgggagaaatgctgcgaaatacatcataaagaacttt
cctcagtattttgacaagacatttgcagagcccaacataccatgcctgatgcccgaggct
ctcaccccccagactgaaggactgagtgaggaagccttaagggagcgcatccacctcaga
atggtgaaagagtctgtggacatgtttgatcagcttctacaggcaggtacccctgtatct
ctggagaccactaacagccttttagatttgttatgcttctatggaggtggtgaacctaga
cctgaaaaagagcaggaagaaaaagaaggtctggaagaaccagaggtgaatgcttcagaa
caaaaagctccaaagaaacgatttcaaagaagttcacagtcatctggtcccaaatggagg
gagaacaaccatgctgaaaggatatttaagataatgccagagaggaatgcacactcctat
tgcacaatgattcgtgggatggtgaagcatgaggcgtattctaaagcttatgacacgtac
atagacttgctgaatgaaaggcacaaggctgatgtgcacaccttcaacgctctgatcaga
gcagtcccatatctaaaggacaggttcacagaaaggtgggaattagccaaggacttcctg
actcaaatggctcaacagaaagtgcaaccaactctgctaacttttaattctgtactgaag
agtctgagaagatgtggtggtgtgggcagaactatgtctttgttggtattaaaggaaatg
gaagcacttgatatagagcccagccttgcgtcctatgatcatctcctctccgtgtattac
aaaggcgttgatgctccatcatcagacatcatctctgaggtgttaaatgaggttgaaaag
cgaagtttcactgcccaggaccctgatgatgccagcttttttaccaccgccatgcaagtg
tgctgtgatcttaaggatatcaaccttgcctatcaggtaaataaggcactggaaaaggga
gacaactggaaattcttggatgtggataggttgaacatatattggtcaaaattcttttca
ttgttgtgcatgatggaacaaattgaggtggtgttgaagtggtacaaagaaatgtcatct
tcactcttctatccaactcctaaaaatatattggacctccttcaagcactggatgcagcc
aaccagttggaagtgatcccttcagtctgggaagatgtgaaacagctggggtttggcagg
agacaggaccttttggaagagttcttgtctttgatgagcagggaccagcaccccagtgag
attcagctggcgtttgccaagtgtgctgaagaaatcaaagctgtccatgagcctgctggg
caggtgcaggtcccgttggagtggacagggagtgctctgggcaatgtcgtggtgctgttt
gccagggctgggaggacccaggatgcctggaaaatgatggagtgtttccagaaaactaat
aggattcccactgacaaggtgatggacgagttcttgaactgtgctaagcaaaccaattgc
ccagatgaggcaattaagatggtaaagctggcagcatcccttgggcttctttcatctcaa
aggctgaaaagcagaacagaggaggaatttgaactctctgaaacacagaagaaggcactg
gagagcatcaagtgggatggagacagcagcgatagcgatagtgacagtgacagtagtgac
agtgaccgcgagtag
DBGET
integrated database retrieval system
