Sylvia atricapilla (blackcap): 136361435
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Entry
136361435 CDS
T10263
Symbol
NR1H4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136361435 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sati03310
]
136361435 (NR1H4)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
136361435 (NR1H4)
Nuclear receptors [BR:
sati03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
136361435 (NR1H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
136361435
NCBI-ProteinID:
XP_066175451
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All DBs
Position
5:46433526..46469186
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AA seq
473 aa
AA seq
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MGSEMNLIGHHQLATADGFPLAEGPHLFGVLSEPMSSPVQEADVSPYAQYNNVPFPQVQP
QISSPPYYSNLGFYPPQHEEWYSPGMYELRRLPSETFFTRETEIMDIPAAKKPRLGHSTG
RVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYMRRKC
QECRLRKCKQMGMLAECLLTEIQCKSKRLRKNVKQPPDQTTNEDNEGHDVKQVTSTTKIY
REKVEFTPEQQKLLDYIMDSYSKQQIPQEVSKKLLNEEFSAEGNFLILTEMATSHVQVLV
EFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFSRKLPTGHTVLLEERIRNSGISD
EFITPMFNFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDRDSVERLQEPLLDILQKVC
KLHHPDNPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgaaatgaatttaataggacatcatcagctagccactgctgatggatttcct
cttgctgaaggtcctcatttgtttggtgtcctttcagagccaatgagttctccagtgcaa
gaggcagatgtgtcaccttatgcacagtacaacaatgtaccgtttccccaagttcagcct
cagatctcatcgccaccttattactccaacctaggcttctaccctccacagcatgaggaa
tggtattcccctgggatgtatgaactcaggaggttaccctcagagacctttttcacacgg
gagacagagataatggatatccctgcagccaaaaagcctagactgggtcactccacggga
agagtgaaaggagaagagctctgtgtggtctgcggtgacaaagcctctgggtatcactat
aatgcccttacttgtgaaggatgcaaaggattcttcagaagaagcatcacaaaaaatgca
gtatacaagtgtaaaaacggaggcaactgcgagatggacatgtacatgaggagaaaatgc
caggagtgccgtttaaggaaatgcaagcagatgggcatgttggctgaatgtctcttaaca
gagatacagtgcaagtcaaaaaggctacggaaaaatgtgaagcagcccccagatcagact
accaatgaagacaatgaaggccatgatgttaaacaagtaacttctacaactaaaatatat
agggagaaggtagaatttaccccagaacagcagaaacttcttgattatattatggattca
tacagtaaacaacaaataccccaggaggtgtcaaaaaaattgttgaatgaggaattcagt
gctgaaggaaattttctgattttaacagaaatggctaccagtcatgtacaggttcttgtg
gaattcactaaaaaactaccaggctttcagacccttgatcatgaggaccagattgctttg
ctgaagggctcagcagtagaagccatgttcctccgttcagctgagatcttcagcaggaaa
cttcctacaggacacactgtccttttagaagaaagaattcgcaatagtggtatctcagat
gaattcataactcccatgtttaatttttataaaagcattggagagctgaagatgacacag
gaagaatatgcactgctcacagccatagttatcctgtctccagatcgacaatacataaag
gacagagattctgtggaaaggcttcaagaaccactgctggatattctacaaaaagtctgc
aaacttcaccacccagataaccctcaacactttgcatgtcttctgggtcgtctcacagaa
ttacggacatttaaccatcatcatgcggagatgctgatgtcgtggagagtgaatgatcac
aaattcacacctcttctctgtgagatctgggatgtgcagtga
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