Sylvia atricapilla (blackcap): 136361793
Help
Entry
136361793 CDS
T10263
Symbol
TDG
Name
(RefSeq) LOW QUALITY PROTEIN: G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
136361793 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sati03400
]
136361793 (TDG)
Enzymes [BR:
sati01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
136361793 (TDG)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
136361793 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
136361793
NCBI-ProteinID:
XP_066176051
LinkDB
All DBs
Position
5:67796394..67806988
Genome browser
AA seq
525 aa
AA seq
DB search
MAAGAGPVHGPRRTCVIPAAAGRGKGTGKRVRRPALSGEHRARRVSRDTAPAPPAAPSRP
LTPSRPPPRSAAPPCAPIGRRGHVSGAAPGVGRGRGHGGHRRGHGGHRRGHGGQDGPGME
GPELGRYYAYLQQAQAFYSFPFHQMMTAVPTMEMMTEQPTLEGIPEPNIAQEPPKEVKKG
GRKRKAKATEPKQPKKPAAKKEKPAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTL
PDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHK
YGIGFTNMVERTTPGSKDLSSKEIREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEVFG
IKVKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIAP
NTEVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYDSDQCSLSSNGA
GGNAQYCEGSSFGEVPNGQWMTQAFAEQIPEFGAGITRAEEGSSV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgggggcgggccctgtgcacggaccgcgccggacgtgcgtcatccccgccgcc
gccgggagagggaagggaacagggaagagggtgcggaggcccgccctcagcggggagcat
cgcgccaggcgggtgagtcgcgacacagcgcccgcacctccggccgccccctcacggccc
ctcacgccctcacggcccccgccccggagcgcggccccgccctgcgcccccattggccgg
cgcggtcacgtgagcggggccgccccgggggtcggcagggggcgcgggcacggcggccac
aggcgcgggcacggcggccacaggcgcgggcacggcggccaggacggccccggcatggag
ggccccgagctgggcagatattacgcgtatcttcagcaagctcaagcgttttactcgttt
cccttccatcagatgatgactgcagtgcccaccatggaaatgatgactgagcagccgact
ctagagggcattccagagccaaacattgctcaggagcctccaaaagaagttaaaaaaggg
ggaaggaaaagaaaagccaaagcaactgagccaaagcaacccaaaaagcctgctgctaaa
aaagaaaaacccgccaagtcaaaaggcaaacaagaaaagatcacagatacttttaaagtc
aaaagaaaagtggaccgttttaatggtgtatctgaagctgaacttctgaccaagactttg
cctgatattttgacctttgatctggacattgtgataattggcataaaccctggcctgatg
gcagcttacaaaggacatcattacccaggacctggaaaccacttttggaagtgtctgttc
atgtctggtctaagcaatgaacagctgaaccacatggatgaccacacgttgccacataaa
tatggcattggatttacaaacatggttgaaaggacaacacctggaagcaaagacctctcc
agcaaagagattcgggaaggagggcgaattctgatgcagaagctacaaaagtataaacct
cgtatagcagcttttaatggaaaatgtatttatgaaatttttagtaaagaagtttttgga
attaaagtaaagaacttggaatttgggctgcagccacacaaagtgccagatacggaaact
ctctgctacgttatgccatcatctagtgcaagatgtgctcagtttcctcgggcacaagat
aaagttcattactacattaagctgaaagacttaagggaccaactgaaaggcattgcaccc
aacactgaggtccaggaggtgcagtacacatttgacttgcaacttgcacaagaggatgct
aaaaagatggctgtcaaagaagaaaagtatgaccccggctatgaagcagcatacggagga
gcttactgtgaccgtgcaccgtatgacagtgaccagtgcagcttgtcctcaaatggagct
ggaggcaacgcacagtactgcgaaggctcgtccttcggggaggttcctaacggacagtgg
atgacacaggcctttgcagagcagattccagagttcggtgctggcatcacaagggcagag
gagggaagcagcgtgtag
DBGET
integrated database retrieval system
