Sylvia atricapilla (blackcap): 136362470
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Entry
136362470 CDS
T10263
Symbol
FYCO1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
136362470 (FYCO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136362470 (FYCO1)
Membrane trafficking [BR:
sati04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136362470 (FYCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
CEP135_TSGA10_CC
RUFY4
DUF7491
Rab11-FIP3
F28H7_8_C
Motif
Other DBs
NCBI-GeneID:
136362470
NCBI-ProteinID:
XP_066177119
LinkDB
All DBs
Position
1:44179090..44220800
Genome browser
AA seq
1570 aa
AA seq
DB search
MAATSGESQLQRIIRDLQDAVTELSKEFKEGGEPITDDSVNLQKFSYKLEYLLQFDQKEK
STLLGNRKDYWDYFCDCLAKIKGANDGIRFVKSITELRTSLGKGRAFLRYSLVHQRLADT
LQQCFMNTKVTSDWYYARSPFLNSKMSSDIVGQLYELTDVQFDLASRGYDLDAAWPAFAR
RTLSSLGSSAYLWKPPSRSSSMSSLVSNYLQAQEFPSSPDVNNSLNVEHLEGYEEMRLEL
DQAELRQRELQDRIHQLEIENQELQAAVSLQKEQVQIEKEKSNNYSEENSRLTKMITELQ
KQCEVSHSTQSTVHDLQKCLQSLELNAGEQQKEHSTKVEQLLTSKEDCASKLQVSNQELE
ASRALIAVKDLCIDELKAKLSSTEQKNLNLLAKVDAVLDEKGQQATAQYDSALQIRALLE
KLQEMEKEKADMQRLSDEHASQLKAAREELLLKEQARKELESRYSSLTANSKEESEKLTG
SLETMAKEKDALQKALTLKGKEMAELQTQVMGSLAQVGSLEKNLEEARKEKEKLEEEYGR
REGALKQESQWQAEQLEQQEGRLTKVSQTVCSLQEQNQKLMSEKEHLGKKVKELEEQMEQ
QNSAVSELDEERRKLKAENENLQQSKKKMEEKLKNLEASKASLEADIARLRASEKQLQSE
IDDALVSVDEKEKKLRGENKQLDEDLQNARRQSQILEERLEALRSEYEELKQREETSKDS
YTSLEAQLKSAKQHSLQMEKSLDSLKESKECLQSQLTEKEVELQGMESQCQQLRAEAERY
RKKAETLEIEKLSVEKTCLHQTKLIESLTSEKESVEKQQLQQAASLEKEAKELSFRLTMS
EEQLEVNRGEVSRLQAEVLDLRVKLQQATDERERMRGELAVAETVLSEQKTLVQQLKEQS
ESLNRNHVQELVQYKEREEKLKKEQERTAHQKAELENNLMNLKEELSKVKRYLENATVEN
EENKDLLHRTNTDMAELGIQICALTSEKVDAEEQLAQATERFKKLEEEAAEQQEKLKLDI
SNLREENKSLQEKLEEAQMCASAVPSLQLQLETIKQQAQSFQETSQEELSAVKFQMSTEI
LNYQTKFKAVSEECGKVREQLEEQRRQQHAVEEEITELQAANTSLCRKLDEAREQLSESE
SARLQKEEEVTSLRELLERIQKEADEAKEKILDYTEKLSKVAADKDSSDQKLFAELDDLT
RTKQFLEERLIELIRDKDALWQKSDALEFQQKLSAEQRWQGDTEVNHCLDCQREFSWMVR
RHHCRMCGRIFCYYCCNNYMVTKLGGKKERCCRACFNKPRVIVDSADDSGSSANQEGSPA
SLESPVSPERAFVASEASKPPDDAAFDIITDEELCQVQESDSLHNESQMERDSLDQSVTD
LCVCWAKQLLGALYSLQSPFQVSAFHTIRNSTSSTFDESEDWQVAQDAEICLLKSGEIMM
KLPLTVEEIMNFGESNRELFIKSSTYSIIPITVTEMGLTISWIFSSDPKSISFSVVYQES
EDTPLDQCKVLIPMTRCNSHKETIRGQVKVRNAGIYTLIFDNTFSRFISKRVFYHLAVER
PIIYDGSDFP
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaactagtggcgaaagccagctgcagcggattatcagagacttgcaagatgca
gtgactgaattaagtaaagaatttaaagaaggaggtgaaccgatcacagatgacagcgtc
aacttgcaaaaattctcctacaagcttgagtaccttttacagtttgaccagaaagaaaaa
agcacattgctggggaacagaaaagactactgggattatttctgtgactgtctggcaaaa
atcaaaggagctaatgatggaatccgctttgtcaagtctattacagaactaagaacctct
cttggaaaaggaagagcatttcttcgttattccctggttcaccaaaggctagcagacacc
ttgcagcaatgtttcatgaacaccaaagtgaccagtgactggtactatgcaagaagtcca
tttctgaattccaaaatgagttctgacattgtgggtcaactctatgagctcactgatgtt
cagtttgacttggcatcaagaggctatgatttagatgctgcttggccagcatttgccagg
aggactctgtcctcacttggatcttcagcatatttatggaagcccccaagtcgtagttcc
agcatgagcagtttagtgagcaattatttgcaggcacaagagtttccttccagccctgat
gtaaataactcactaaatgttgaacaccttgagggctacgaagagatgcgtttagaactt
gaccaggctgagctgaggcagagggaacttcaagatcgtattcaccagctagaaattgaa
aaccaggagctccaggcagctgtcagccttcaaaaagaacaagtacagatagaaaaggag
aagagcaataactacagtgaggagaactcccggctgacaaagatgatcacagagttacag
aagcagtgtgaggtctcacactccactcagagcactgtccatgacctgcagaaatgccta
cagtcactggaactgaatgcaggggagcagcagaaggaacactcaacaaaggtggagcag
ctgttgaccagcaaggaagattgtgcctcaaaattgcaggtttcgaatcaggagctggag
gcctctagggctttgattgctgtgaaggatctttgcattgatgagctcaaagccaagctg
agttccacagaacagaagaacctcaacctccttgcaaaagttgatgctgtcttggatgaa
aagggacagcaagccacagcccagtatgactctgccctacaaatacgggcactgttagag
aagcttcaggagatggaaaaggaaaaggcagatatgcaaagactcagtgacgaacatgca
tctcagctgaaagcagcgagggaggagctgctgctgaaagaacaggcacggaaggaactg
gaatccagatacagtagcctcactgctaactccaaagaagagagtgaaaaactgactggg
agcctggagaccatggcaaaggaaaaggatgcacttcagaaggccctgactctgaaagga
aaggagatggctgagctccagacccaggtaatggggtcgctggctcaggtgggttcactg
gaaaaaaatcttgaggaagccaggaaggaaaaagagaaacttgaggaggagtatggtagg
agggaaggagcactgaagcaggaatcccagtggcaagcagagcaacttgaacaacaggag
ggtcgcttaacaaaggtgagtcagactgtgtgtagccttcaggagcaaaaccagaaactc
atgtctgagaaggagcatcttgggaagaaagtcaaggagctggaagaacagatggagcag
caaaactctgcagtgagtgaattggatgaggaaaggaggaaactgaaagcagagaatgag
aatttgcagcagtctaagaagaagatggaagaaaaactgaaaaatctggaagcttctaaa
gcttccctagaagctgacatagccaggttgagagcctctgagaaacaacttcagagtgag
atagatgatgccctggtgtcagttgatgaaaaagagaagaagctccggggtgagaacaaa
cagctggatgaagacttgcagaatgccaggaggcaaagccaaattctagaggagaggctg
gaggctctgcgctcagaatatgaagaactaaagcaaagagaagagacctccaaggactct
tacacctcacttgaagcacagctgaagagtgccaaacaacatagtttacaaatggaaaaa
agcttggactccttgaaggaaagcaaagagtgtctccagtcacagctcacagagaaggaa
gtagaactgcagggcatggagagccagtgtcagcagctaagagcagaagctgaaagatac
aggaagaaagcagagactcttgagatagaaaagctcagtgttgaaaagacatgtcttcat
cagacaaaacttatagaatctctcacatcagaaaaggaatcagtggaaaaacagcaacta
cagcaggcagcatccctggagaaggaggcaaaggagctgtccttcagactgaccatgagt
gaagagcagctggaggtcaaccgaggtgaagtgtccaggctgcaggcagaagtcctcgat
ctgcgagtcaagcttcagcaggccactgatgagagagagaggatgagaggtgagctggca
gttgctgagactgtcttgagtgagcagaagactcttgtccagcagctgaaagagcagagt
gagtctctcaacagaaatcatgtgcaagaactggtgcaatataaagaaagggaagaaaag
ctgaaaaaagagcaggagagaacagcccatcaaaaagctgagctggaaaataatttgatg
aatctaaaggaagagctgtctaaggttaagcggtatttggaaaatgctacagtggaaaat
gaagaaaataaagatctcctccacaggaccaacactgatatggctgaacttggtattcag
atttgtgcattgacctctgaaaaggtggatgcagaagagcagttggcccaggccacagaa
aggttcaaaaaactggaagaagaggcggcagagcaacaggagaagctgaagcttgacatc
tctaatctcagagaggagaacaagagcctgcaagagaaattggaggaggctcaaatgtgt
gcttcagctgtcccaagtctgcaattgcagctggagacaataaagcaacaggcacagagt
ttccaagagaccagccaagaagagctgtctgcagtaaaatttcaaatgagcacagagatt
ctaaattatcagacaaaattcaaggctgtcagtgaggagtgtgggaaagtaagagagcaa
cttgaggagcagaggcgacaacagcatgcagtggaggaagagattacagagttacaagct
gcaaacacgagtttgtgtagaaagctggatgaagcaagagaacagctgtcagaatcagaa
tctgctcggctgcagaaggaagaggaagtgacttctcttcgagaactcttggaaaggatc
caaaaagaagctgatgaagcaaaagagaagatcctggattacactgagaagctcagcaaa
gtggcagcagacaaagatagcagtgaccagaagttatttgctgaactggatgatctgaca
agaacaaagcagttccttgaagagcgtttgatagaacttatcagagataaggacgctttg
tggcaaaaatccgacgctctggagttccagcagaagcttagtgcagagcagaggtggcag
ggggacacagaagttaatcactgtctggactgccagagagagttctcatggatggtgcgc
cgacaccactgcagaatgtgtggccgcattttctgctactactgctgcaacaactacatg
gtgacaaagcttggtggaaaaaaggagcgttgctgcagagcttgctttaataagcctaga
gtcattgtggacagtgcagatgactctggatccagtgccaaccaggaaggatcaccagct
tcattggaatcgcctgtgtcacctgagagggcttttgttgcaagtgaagcctctaaacct
ccagatgatgcagcttttgatataatcactgatgaggagctgtgccaagtacaggaatca
gactctctccacaatgaaagtcagatggaaagagactctctggatcaaagtgtgacagat
ctatgtgtttgctgggctaagcagctgttaggggctctgtacagcctccagtctccgttt
caggtttctgcctttcacacaattcgaaacagcacatcttcaacctttgatgaatccgaa
gactggcaagttgctcaagatgctgagatatgcttgctgaagtcaggagaaattatgatg
aaattacctcttacagtagaagagatcatgaattttggagaaagcaacagagagctgttc
atcaaatccagcacctacagtatcattcccatcactgttacagagatgggactaacaatt
agctggatcttctcatcagaccccaaaagcatatccttcagtgttgtctaccaagagtcg
gaagacacgccgctggatcagtgcaaagttcttatccctatgactcgctgcaactctcat
aaggaaactatcagaggacaggtgaaagtcagaaacgctggaatctacaccctgatattt
gataacacattctctaggtttatctcaaaaagagtgttttatcacttggctgttgagcga
cctatcatctatgatggaagtgatttcccatag
DBGET
integrated database retrieval system
