Sylvia atricapilla (blackcap): 136362514
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Entry
136362514 CDS
T10263
Symbol
NR1H3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03320
PPAR signaling pathway
sati04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
136362514 (NR1H3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
136362514 (NR1H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136362514 (NR1H3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sati03310
]
136362514 (NR1H3)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
136362514 (NR1H3)
Nuclear receptors [BR:
sati03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
136362514 (NR1H3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
136362514
NCBI-ProteinID:
XP_066177217
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Position
6:complement(23520460..23551338)
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AA seq
409 aa
AA seq
DB search
MGPTQLSTQDHGKRVASVFEMEEEGLPLFPGSENPPEHAENPPLKRKKGPAPKMLGNEVC
SVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYVCKNGGKCEMDMYMRRKCQECRLRKC
QEAGMREQYVLSEEQIRLKKLKKQEDDQARTVVVRPNPPNPPSPSHKLTPEQLSMIKKLV
AAQQQCNQRSFTDRLKVTPWPQIPDPNNREARQQRFAHFTELAIISVQEIVDFAKQLPGF
LELTREDQIALLKTSTIEVMLLETSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINP
IFEFSKGMNELQLNDAEYALLIAINIFSADRPNVQDQSLVERLQHTYVEALHSYICINRP
NDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccactcaactcagcacacaggatcatgggaagagggtggcaagtgtatttgag
atggaggaggaagggcttccgctcttccctggctcagagaacccccctgagcatgcagaa
aatccccccttgaagcggaagaagggcccagcccctaagatgctgggaaacgaagtgtgc
agtgtgtgtggggacaaggcctctggcttccactacaacgtgctgagctgtgaaggctgc
aagggcttcttccgccgcagtgtcatcaagggcgcgcagtacgtctgcaagaacggcggc
aagtgcgagatggacatgtacatgcgccgcaagtgccaggagtgccggctgcgcaagtgc
caggaggccggcatgcgggagcagtatgttctgtctgaagaacagatccgactgaagaag
ctgaagaagcaggaagacgatcaggctcggacagttgtggtgcgtccaaaccctccaaat
ccgccaagcccttcccacaaactgacgccggagcagctgagcatgataaaaaagctcgtg
gccgcacagcagcagtgcaaccagcgctcctttacagacaggctcaaagtgacgccatgg
ccccagattcctgatccaaataaccgtgaagcaaggcagcagcgttttgctcacttcaca
gaacttgcaattatctctgtgcaagagattgtggactttgccaagcaattacctggcttc
ctggagctcaccagggaagatcagattgctttactgaagacatctaccatagaggtgatg
ttgttggagacatctcggcgctacaatccagagattgagagcatcacgtttcttaaggac
ctgagctacaatcgggatgacttcgctaaagcaggtctgcagtttgagttcattaaccct
atctttgagttctcaaagggaatgaatgagctacagcttaatgatgctgaatatgcactt
ttaattgccatcaacattttctctgcagaccgaccgaatgtgcaggatcagtccctggtg
gaaaggctgcagcacacctatgtggaagcgcttcattcttacatttgcatcaacagacca
aatgaccgcttgatgtttccacggatgttaatgaagctggtcagtcttcggacactgagc
agtgtccactctgaacaggtgtttgcccttcggctgcaggacaagaaactcccgcccctg
ctctcagaaatctgggatgtgcatgagtga
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