Sylvia atricapilla (blackcap): 136362665 Help Entry 136362665         CDS       T10263                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism sati  Sylvia atricapilla (blackcap) Pathway sati04115   p53 signaling pathway sati04145   Phagosome sati04148   Efferocytosis sati04350   TGF-beta signaling pathway sati04510   Focal adhesion sati04512   ECM-receptor interaction sati04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sati00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     136362665 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     136362665 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     136362665 (THBS1)    04148 Efferocytosis     136362665 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     136362665 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     136362665 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     136362665 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sati04131]     136362665 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sati00536]     136362665 (THBS1) Membrane trafficking [BR:sati04131]  Endocytosis   Phagocytosis    Opsonins     136362665 (THBS1) Glycosaminoglycan binding proteins [BR:sati00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    136362665 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  136362665 NCBI-ProteinID:  XP_066177512 LinkDB All DBs Position 6:complement(30861931..30877721) Genome browser AA seq 1177 aa AA seqDB search MRPATALCLLLLVLGSSETKRAAESRNDDNSVFDLFELTGFMRKGAGRRAPGVYLVKGPE SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGS GHVFSLVSNGKAGSLDLSLSVDGKQQLVSVEDVLLATGHWKNITLFVQEDRAQLYVGCEK MENAELDIPIQSIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS SSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVEMQGLRSMVTTL QDRVRKVTEENEIIAKVVQITPGACIHNGVLHKNKEEWTIDSCTECTCQNSATICRKVSC PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP CEGEARENKACQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVG EAKGTQVCNKQDCPIDGCLSNPCFAGATCTSAPDGSWKCGACPAGYHGDGIHCQDIDECK EVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMTNKQVCKPRNPCTDG THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHC KKDNCPNLPNSGQEDYDKDGIGDACDSDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR CDNCPYNHNPDQTDTDNNGEGDACAIDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC DNCPLEHNPDQEDTDSDLIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEIS ETDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMA DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt atgaggccagccactgctctctgcctccttctcctcgtgctcggcagctcagagaccaag cgcgctgcagagtccaggaatgatgataacagtgtcttcgatctctttgaactcactggc ttcatgcggaagggagccgggcgccgggcccccggggtgtacctggtgaagggaccggaa tcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactcg aagttccaagatttactagatgccatccatgctgagaagggcttcattctcctggccact ctccggcaagccaagaaaagcagaggcacactgctctctgtggaacagaaagatggctct ggtcatgtcttcagtctagtatcgaatggcaaggcaggctccctggacctgagcctttct gttgatggcaaacagcagttagtgtcagtagaggatgtcttgctagctacaggacactgg aagaatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaa atggagaatgctgaactggacatccctatccagagcatcttcactagggacctggccagc agtgccaggctccgtattgccaaagggggagtcaatgacaacttccagggtctgctgcag aatgtgcggtttgtgtttggaacaactctggaaactatcctgaggaacaaaggctgctcc agctccactagtgcaatcattactttggacaaccccatcaatggttccagcccagctatc cgcactaattacatcggtcataaaacaaaagacatccaagcagtctgtggattttcctgt gatgagctgacaaatatgtttgtggaaatgcaagggctacgatccatggtgacaacactt caagacagagttcgcaaagtgactgaagaaaatgagatcattgccaaagttgtccagatc actcctggagcatgcattcataatggagtcttgcacaaaaataaagaggagtggactatt gacagctgcactgaatgtacttgccagaactctgctactatatgccggaaagtctcctgt cctctcatgccttgttccaatgccactgtgcctgatggagagtgctgccctcggtgctgg cctagcgactatgcagatgatgggtggtctccttggtctgagtggacctcatgttctgtg acctgtggtaatgggattcagcagagaggccgttcctgtgacagcctcaataaccgctgt gaaggctcctctgtacagactcggacttgccaccttcaggagtgcgataagagatttaaa caggatggtggctggagtcactggtcaccatggtcatcgtgttctgtcacctgtggtacg ggcatcatcactagaattcgtctttgcaactctccagtaccacagctgaacggcaagcct tgtgagggtgaagcaagagaaaacaaagcctgccagaaagatccttgcccaattaatggc aactggggaccatggtctccatgggatgcatgcacagtgacatgtggaggaggacttcag aaacgaagccgtctctgcaataatcctgagcctcagtatggtgggaagacttgtgtaggt gaagctaaagggactcaggtctgcaacaaacaggactgtccaattgatgggtgtttgtct aatccctgctttgcgggggctacgtgcaccagtgcccctgatggttcctggaagtgtggt gcctgtcccgctggctaccatggtgatggtattcactgccaagatattgatgagtgcaaa gaggttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaatactgaacct gggtacaactgtctgccttgtccaccacgtttcactgggacacaaccatttggccgcagt gttgaggatgccatgactaacaaacaggtctgcaagccacgtaatccatgcacagatgga acacatgactgcaacaagaatgccaagtgcaattaccttggccactttagtgaccccatg tatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatact gacttggatggatggccaaatgagaacctggtttgtgttgctaatgctacttaccactgt aaaaaagataactgccctaatctgccgaactcagggcaggaagactatgataaggatggg attggtgatgcctgtgacagtgatgatgatgacgatggcattcctgatgaccgggacaac tgtccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgaccgc tgtgacaactgtccctacaatcacaaccctgatcaaactgacactgacaacaatggagag ggagatgcatgtgcaatagatattgatggagatggggtgcttaatgaaagagacaactgt cagtacgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgt gataactgtccactggaacacaaccctgaccaggaagacacggattctgatctcataggt gatcagtgtgacaacaaccaggacatagatgaagatggccatcaaaataatcttgataac tgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcc tgtgaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagattggtt gccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgac tttgaccaagacagtgtgccagacattgatgatatctgccctgaaaatgtggaaattagt gagactgatttccgaaaatttcagatgattcccctggatcccaaaggaacatcccaaaat gatccaaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaattgtgac cctggccttgcagtcggttttgatgaattcaatgctgtggacttcagtggtaccttcttt atcaatacagaaagggatgatgattatgctggctttgtgtttggttaccagtctagcagt cgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaacc aaagctcaaggctattcaggtctctccatcaaagttgtgaattccaccactggtccagga gaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttg tggcatgatcctcgtcacatagggtggaaagacttcactgcatacagatggcgacttagc catagaccaaagaccggctacatcagggttgtaatgtatgaagggaagaaaattatggct gactcaggaccaatctacgataaaacctatgctggtggccggctaggattatttgtcttc tctcaagaaatggtgttcttctcagaccttaaatatgaatgcagagattcataa

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