Sylvia atricapilla (blackcap): 136363647
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Entry
136363647 CDS
T10263
Symbol
GLI2
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
136363647 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136363647 (GLI2)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
136363647 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
136363647
NCBI-ProteinID:
XP_066179154
LinkDB
All DBs
Position
7:26656171..26842741
Genome browser
AA seq
1527 aa
AA seq
DB search
METSASTAAGKKEGKGAVLEGNGFTETGKKPTPLVAAGAAVAQGVPQHIFPAFHAPLPID
MRHQEGRYHYEPHSIHAIHGPPPLSGSPVISDISLIRLSPHPAGPGESPFSPAHPYVAPH
MEHYLRSVHSSPTLSVISAARGLSPADVAHEHLKERGLFGLPPPPPGANPADYYHQMTLM
AGHPNPYGDLLMQGGGAASTAHLHDYLSPVDVSRFSSPRVTPRLSRKRALSISPLSDASI
DLQTMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGTISPAFSFPHPLNPVTYQQILTQQ
RGLSSAFGHTPPLIQPSPTFPPRQHMAVISVNPSPAQSSSNSNCISDSSQSKQSSESAVS
STVNPVNNKRSKVKTEVEGLPPVSPNTQEHLTDLKEDLDKDECKQEPEVIYETNCHWEGC
TKEYDTQEQLVHHINNDHIHGEKKEFVCRWQDCTREQKPFKAQYMLVVHMRRHTGEKPHK
CTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPY
VCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHPRPPPLKENGDNEASAKQSN
KVSEETPEANSTTRSVEDCLQVKTIKTENSVMCQSSPGGQSSCSSEPSPLGSTNNNDSGV
EMNMHSGGSLGDLTALDDNAPVVDSTVSSGNSAVSLQLRKHMTTMQRLEQLKKEKLKTVK
DSCSWVSPAPQARNTKLPPISGNGSVLENSGGSAMLPNPRIMELSVNEVTMLNQLNERRD
STTSTVSSAYTVSRRSSGISPYFSSRRSSEASHLGHRPNNTSSADSYDPISTDASRRSSE
ASQCSGMPGLLNLTPAQHYRLKAKYAAATGGPPPTPLPNMERMTLKNRISLMDGPDPTLP
SIRLPPGPRRCSDGNSYGYPSAPAFPHEVQGNCTRRASDPVRRPPGDPQALPRVHRFNST
NSMNPFHPPHPTDRRNFGLQSYGRSDGSLPRHTYSPRPLSISENIAMEAMSGETDAPIGD
DDIMLPDDVVQYIKSQSNGTVAESTSMGYSNEMQNFQGSGKLQPPALPNQRRMAVAEASM
SHLGPMMAECSMSFDTTSDMNKNNMPVQWNEVSSGTVDIMSNQSKQQFSQGNLAVVQQKQ
NFGQYQNYNQQQMQLPDNSMNATQQSFMQRNMGMDGQRLNCMQLRQQPMSLGPNMNPDMG
LHTGYNQPHQMLSSSAISGNPNQISPNCSNMAAKSAPHLHPQQMDMATDPSLMVRSNSER
TVLGQVMHEPSQQNYSSQPSHLNFPVAQETFPQPIMTSNQPSFEPQQSVMGSAPQAYPPG
MIQPRPPAEPNPGSRPRGVRSAQQLGYMRTPHPTNTISPGQETTETMHKRASDMVLAPAQ
QCADGTRDNNLMYYYGQIHMYEQNNGFDNHADCRVRQQQCTQNSKPATLPSPGTNQVSST
VDSQGLEPPQIDFDAIMDDGDHSSLMSGTLSPSILQNLSQNSSRLTTPRNSLTLPTIPAG
ISNMAIGDMSSMLTTLAEESKFLNMMS
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttctgcttcaacagctgctgggaaaaaagaagggaaaggtgctgttctggaa
gggaatggctttacagagacggggaagaaacccactcctttagtggcagcgggagcagca
gtggcacaaggagtgccgcagcacatttttccggccttccacgctcctctgccaattgac
atgcgccaccaggaaggacgataccattacgaacctcactctatccacgctatccatggg
ccgcctcctctgagcggcagccccgtcatctccgacatctccctcatccgcctgtctccg
caccctgccgggcctggcgagtcgcccttcagcccagcgcacccctacgtggcaccccac
atggagcactacctccgctctgtgcacagcagccccacgctctccgtcatctctgctgcc
aggggcctcagtcctgccgacgtggctcatgagcacctgaaggaacgaggcctcttcggg
ctgcccccaccaccgccgggagccaaccctgctgactactaccaccaaatgacgctgatg
gccggccacccaaacccctatggggacctcctcatgcagggcgggggagcagccagcaca
gcacacctccacgattacctcagccccgttgatgtgtcccggttttcgagcccacgggtg
actccgagattaagccggaaacgagccctgtccatctctccgctctctgatgccagcatt
gatctccagacaatgatcaggacctccccaaactctcttgtggcatatatcaacaactcc
agaagcagttcagcagcaagtggctcctacggccatttatctgccgggacaatcagtccg
gcattcagcttcccccacccgcttaaccccgtgacataccagcagatcctgacccagcaa
agaggcctgagctcagcctttggacacactcctcccctgatccagccatccccaaccttc
cccccacggcagcacatggcagtcatctctgtcaacccatcaccagcacagagcagcagc
aacagcaactgcatctctgactccagccagagcaagcagagcagtgagtcagctgtgagc
agcaccgtcaatccagtaaataacaaacgcagcaaagtcaagactgaagttgagggcttg
cccccagtgtccccaaacacacaggagcatctgacagacctgaaagaagatcttgataag
gatgaatgtaaacaggagcctgaggttatttatgagactaactgtcactgggaagggtgc
acaaaggaatatgacactcaggagcagctcgtccatcacatcaacaacgatcacatccac
ggggagaagaaggagtttgtctgccgctggcaggactgcacacgggagcagaagcccttc
aaggctcagtacatgttggtggtgcacatgcgaaggcacacgggagagaagccacacaag
tgcacgtttgagggttgttccaaggcctattcccgcctggagaacttaaagacacacctg
aggtcccacactggagaaaagccttatgtctgtgaacacgaaggctgcaataaagccttt
tccaatgcctcggacagagccaagcaccagaacaggacacattccaatgagaaaccctac
gtctgtaaaatccctggctgcacgaagcggtacacagaccccagctccctcaggaaacac
gtcaagacggtgcacgggcctgatgctcatgtcacaaagaagcagcgcaatgacgttcac
ccaaggccaccgccactcaaggaaaatggggacaatgaggcgagcgccaagcagagcaac
aaggtgtcagaggagactcctgaggccaacagcaccaccaggagcgtggaggattgctta
caagtcaaaacaataaaaacagagaattctgtgatgtgtcagtccagtcctggtggccag
tcatcatgcagcagtgagccatcaccccttggcagcaccaacaacaatgacagtggagta
gaaatgaacatgcacagcgggggaagtctgggagatctgacggcgttggatgacaacgct
cctgtcgtggactcaacggtctcatctggtaactcggcagtcagcctgcagctgaggaaa
cacatgacgacgatgcaacgacttgaacaactcaagaaagagaaactcaagacagttaag
gattcctgctcatgggtgagcccagctccacaagccagaaacaccaagctgcctcccatc
tcaggaaatggctctgttctagaaaatagtggtggttctgctatgctgcctaaccccaga
ataatggagctgtctgtcaatgaggttacaatgctgaaccaactcaacgagcgccgtgac
agtacaacaagcaccgtcagctctgcctacactgtcagccgcagatcctcggggatctcg
ccgtacttctccagccgccgttccagtgaggcttcccatctcgggcaccgccccaataac
acaagctctgctgactcctacgaccccatttccacggatgcttcccgccggtcgagcgag
gcgagccagtgcagcgggatgccgggtctgctgaacctcacaccagctcagcactacagg
ctgaaagccaagtacgctgctgccacagggggccctcctccaactcctctgccaaacatg
gagaggatgaccctgaagaacaggatctcacttatggatggaccagaccccaccttgccc
tccatccgcctcccgccaggccccaggcgttgcagtgatggtaacagctatggctacccg
tcagctccagcatttccccatgaggtgcagggcaactgcacaagacgggcaagtgaccca
gtgaggagacctcctggagatccccaggctctcccacgagttcaccgcttcaacagcaca
aacagcatgaaccccttccaccctccacaccccacagacaggaggaattttggtctccag
agctacgggcgctcagacgggagcctgccccggcacacctactcgccccgaccactgagc
atcagtgaaaacatcgccatggaggccatgtccggggagacagatgcacccattggagat
gatgacattatgctgccagatgatgtggtacagtacatcaaatcccagagcaatgggaca
gtggctgagagcacttccatggggtacagcaatgagatgcagaacttccaaggaagtggg
aagctgcagcctccagccttgcccaaccagcgcaggatggcagtggctgaggcaagcatg
agccacttgggacccatgatggcagagtgttccatgagttttgatactacttcagacatg
aataagaataatatgcctgtccagtggaatgaagtcagctcaggcacagttgatatcatg
tccaatcagtcgaagcagcagttttcacaagggaacttagcggtggtccagcagaagcag
aactttggtcagtaccagaactacaaccagcagcagatgcagctgccagacaacagcatg
aatgcaacacagcagagctttatgcagagaaacatgggtatggatgggcagaggctaaac
tgcatgcagctgcggcagcagcccatgagcctaggtcccaacatgaaccccgatatgggc
ttgcacacagggtataaccaaccacatcagatgctgagctccagtgcaatcagtggcaac
ccaaatcagatctctcctaattgcagcaacatggcagcaaagtctgcaccccaccttcac
cctcagcaaatggacatggcaaccgacccttctttgatggtcagaagcaacagtgagcgg
acagtgctgggacaggtcatgcacgaaccaagtcagcagaactactcatctcagccaagc
cacctgaacttccctgtggctcaggagacctttcctcagcccatcatgacttccaatcag
cccagttttgagcctcagcagagcgtgatgggttcagctccacaggcatatccacctggc
atgatccagcctcgtcctccagcagagccaaacccgggcagcagaccccgaggggtccgc
agcgcccagcagctgggctacatgagaactccccatcctacgaacaccatcagccctggc
caggagacaacagagaccatgcataaaagagccagcgacatggtgctggcaccagcccag
cagtgcgcagatggcacaagggacaacaacttgatgtactattacggccaaatacacatg
tatgagcagaacaacggctttgacaaccacgcggactgtcgggtcaggcagcagcagtgc
acacaaaacagcaagccagccactctgccttccccaggaacaaaccaggtgtccagcaca
gtggactctcaaggtcttgagccaccccagatagattttgatgccatcatggacgatggg
gaccattcaagcctgatgtcgggaaccctgagccccagcatcctgcagaacctctcccag
aactcctctcgcctgacgactccacgaaactctctgacactgcccaccatacctgcaggg
ataagcaatatggcaattggtgatatgagctccatgctaaccacgctggcagaagagagt
aaatttctaaacatgatgtcgtaa
DBGET
integrated database retrieval system