KEGG   Sylvia atricapilla (blackcap): 136364041
Entry
136364041         CDS       T10263                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
sati  Sylvia atricapilla (blackcap)
Pathway
sati03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sati00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136364041 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sati03041]
    136364041 (SMNDC1)
Spliceosome [BR:sati03041]
 Complex A
  U2 snRNP components
   U2 related factors
    136364041 (SMNDC1)
 Complex B
    136364041 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    136364041 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067
Other DBs
NCBI-GeneID: 136364041
NCBI-ProteinID: XP_066179702
LinkDB
Position
8:10296465..10306373
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNADNEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagaccttgctaagcagttggccagctacaaagctcagctccagcaagtcgag
gctgccttatctggcaatgcagacaatgaggatttactgaaactgaagaaagacttacag
gaagtcatagagttaaccaaagatctactttcaacacaaccttcagagactcttgcaagt
tctgacagttctgcctctgccctgcccagtcactcatggaaggttggggataggtgtatg
gccatatggagtgaggatggacagtgttacgaagctgagattgaagaaatagatgaggag
aatggaacagcagcggttacatttgctggatatggcaatgctgaagtcacacccctgttc
aacctgaagcctgtggaagagggaaggaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagcccagcaacgagagtataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaggaacgagaggaccagaaagtcaagtggcaacag
tttaacaacagagcctattctaaaaacaaaaaaggccaggtgaaaaggagtatttttgct
tcccctgagagtgtaactggcaaggttggcgttggaacgtgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatataatgtcaggcatcttatgcctcagtaa

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